Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177905.1_202017-04-
25] 4,892 sequences; 11,751,231 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq1903 134 1e-26
seq2779 131 2e-25
>seq1903
Length=131
Score = 134 bits (148), Expect = 1e-26
Identities = 109/131 (83%), Gaps = 1/131 (1%)
Strand=Plus/Minus
Query 8386 CGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGT 8445
|||||||||||| |||| |||||| |||||| | |||||||||||||||||||| |||
Sbjct 131 CGCTCACTGCAAGCTCCACCTCCCAGGTTCACACCATTCTCCTGCCTCAGCCTCCCAAGT 72
Query 8446 AGCTGGGATTACAGGCAAAAGCCACCACGCCAAGCTAA-TTTTTGTATTTTTAGTAGAGA 8504
||||||| |||||| |||||| ||| ||||| |||||||||||||||||||||
Sbjct 71 AGCTGGGTCTACAGGTGCCCACCACCAGGCCCGGCTAATTTTTTGTATTTTTAGTAGAGA 12
Query 8505 GAGGGTTTCAC 8515
|||||||||
Sbjct 11 CGGGGTTTCAC 1
>seq2779
Length=10122
Score = 131 bits (144), Expect = 2e-25
Identities = 379/577 (66%), Gaps = 15/577 (3%)
Strand=Plus/Plus
Query 23500 AACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAA 23559
||||| || |||||||| || || | ||||| || |||| |||||||| || |||
Sbjct 431 AACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAA 490
Query 23560 AATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCG 23619
|| ||||| || ||||| | |||| ||||| | ||| || || | ||||| || |||
Sbjct 491 AAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCG 550
Query 23620 GAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTA 23679
|| || || | ||| |||| | |||||||| || || | | |||||| || | |
Sbjct 551 GAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCA 610
Query 23680 TAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCA----ATTGT 23735
|| ||||||| || | ||| | |||||| | || | | || ||
Sbjct 611 GCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTC----TCACCGATTTCTGGGATGGT 666
Query 23736 TTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAG 23795
| ||| || || || | || |||||| | || | || || ||||| || |
Sbjct 667 GTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGATCAA 726
Query 23796 TAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCT 23855
|| || ||||||| |||||||||||||| || || || || || |||| |
Sbjct 727 CAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTT 786
Query 23856 AGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACC 23915
|| || | | ||| || || | | || ||| | | || ||||| |||||||||||
Sbjct 787 TGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACC 846
Query 23916 ATCACTAGCAGCAAAGAAAGCAAGAACATATTTTAT--AAAATGTCT--TTCATCAGTTG 23971
||| ||| || || || |||||||| || ||||| ||| ||| || |||
Sbjct 847 GTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTC-TC-GTTC 904
Query 23972 ATAAT-TTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAA 24030
|| | || ||||| |||| ||||| || || ||||||| ||| ||| | ||||| |||
Sbjct 905 ATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAA 964
Query 24031 CTTGCCAAGGCACGCTTATACATTAGCCAAATATCAT 24067
|| ||||||||| || | |||| || ||||
Sbjct 965 GAAGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCAT 1001
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521456111008800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |