Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177915.1_202017-04- 25] 4,708 sequences; 12,504,838 total letters Query= NC_004681.1 Length=75931 Score E Sequences producing significant alignments: (Bits) Value seq1228 233 9e-57 seq2953 87.8 9e-13 >seq1228 Length=733 Score = 233 bits (258), Expect = 9e-57 Identities = 401/593 (68%), Gaps = 38/593 (6%) Strand=Plus/Minus Query 66920 CAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAG 66979 ||||||||||| || |||||||| || |||||| ||| | || || || |||| | Sbjct 731 CAGCCGGACACGGGGGAGCAGGCGCTCGAGATCACGGACATGCTGATCCGCTCGGGCGCG 672 Query 66980 CTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGC 67039 || |||| ||||| | ||||| || |||||||| ||||| || ||| |||| ||| Sbjct 671 CTCGACATCATCGTCATCGACTCCGTCGCGGCCCTCGTGCCCAAGGCGGAGATCGAGGGC 612 Query 67040 GACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAG 67099 || || || ||||| |||||||| || || || ||||||||||||||||| |||||||| Sbjct 611 GAGATGGGCGACAGCCACGTCGGTCTCCAGGCCCGCCTCATGTCGCAGGCGCTGCGCAAG 552 Query 67100 CTCACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAG 67159 |||| || | || | || |||| | ||| |||||||| | |||||| Sbjct 551 ATCACCGGTGCGCTCAGCGCGTCCGGCACGACCGCCATCTTCATCAACCAGCTCCGCGAG 492 Query 67160 AAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGCTTTGAGG 67219 |||||||| |||| || |||| | ||||| || || || || ||||| ||| | Sbjct 491 AAGATCGG---CGTGTTCTTCGGCTCTCCCGAGACGACGACCGGTGGCAAGGCGCTGAAG 435 Query 67220 TTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGC------ 67273 ||||||||||| ||||| | || |||| ||||||| ||| ||||| ||| Sbjct 434 TTCTACGCCTCGGTCCGTCTCGACATCCGCCGCATCGAGACCCTCAAGGAGGGCANNNNN 375 Query 67274 -----------------------------GATGAGGCTGTCGGCAACCGCACCCGGGTGA 67304 | || ||||||||||| ||||| |||| Sbjct 374 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGCGGTCGGCAACCGGACCCGCGTGA 315 Query 67305 AAGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACG 67364 | ||||||||||||||| |||| |||||| | | ||||||||| | || | |||| Sbjct 314 AGGTCGTCAAGAACAAGATGGCGCCGCCGTTCAAGCAGGCCGAGTTCGACATCCTCTACG 255 Query 67365 GGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGTGTCGCAGGGCCTGGTGA 67424 ||| |||||||| || |||| | ||| ||||| ||| |||| ||| || | ||| Sbjct 254 GGGTCGGCATCTCCCGCGAGGGTGGCCTCATCGACATGGGCGTGGAGCACGGGTTCGTGC 195 Query 67425 AGAAGTCGGGCGCCTGGTTCAAGTACGGGGACAAGAACGTCGCTCAGGGCAAG 67477 ||||| || | ||||||| ||||| | | | | ||| ||||||||| Sbjct 194 GCAAGTCCGGGTCGTGGTTCACCTACGGCGGCGACCAGCTCGGGCAGGGCAAG 142 >seq2953 Length=185 Score = 87.8 bits (96), Expect = 9e-13 Identities = 130/184 (71%), Gaps = 13/184 (7%) Strand=Plus/Minus Query 61187 GTCGCCAACTTCACCGTCGTGTCCAACGAACGCCGCCG-----CGACGCCCAGGGCAAC- 61240 || ||||||||||| || | ||||| |||||| | |||| |||| ||| Sbjct 183 GTGGCCAACTTCACGGTGGCGTCCA-----CGCCGCGGACCTTCGACCGCCAGTCGAACG 129 Query 61241 --TGGGTCGACGGCGACGCCACATTCCTCCGCTGCACCATCTGGCGCGACGCCGCCGAGA 61298 ||| ||||| ||| || ||| | |||||| | ||||||||||| ||||| |||| Sbjct 128 AGTGGAAGGACGGGGACACCCTGTTCATGCGCTGCTCGATCTGGCGCGAGGCCGCGGAGA 69 Query 61299 ACGTGGCGGAAAGCCTCCAGAAAGGCCAGCGCGTCATCGTGCATGGCTACCTCAAGCAGC 61358 |||| ||||| || ||| ||| ||||||||||||||| ||| |||| |||| Sbjct 68 ACGTCGCGGAGTCGCTGACGAAGGGCATGCGCGTCATCGTGCAGGGCCGCCTCGTCCAGC 9 Query 61359 GCTC 61362 |||| Sbjct 8 GCTC 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242840465318096