Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177915.1_202017-04-
25] 4,708 sequences; 12,504,838 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq1924 183 3e-41
>seq1924
Length=38270
Score = 183 bits (202), Expect = 3e-41
Identities = 563/857 (66%), Gaps = 39/857 (5%)
Strand=Plus/Plus
Query 12842 TTTGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTT 12901
|| ||||||||| ||||| || || |||||| ||||| || ||||| || ||
Sbjct 173 TTGGACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTA 232
Query 12902 CCTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACAA-TAGTATTTTTT 12960
|| | || || || |||||||| |||||||| || |||| ||| | |||||||| ||
Sbjct 233 CCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTT-CGACCTTGTAGTATTTCTT 291
Query 12961 ACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATC 13020
|| || | | |||| |||||| || || ||||| | ||| || |||||||| ||
Sbjct 292 GTTACCGAAAGCGACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTC 351
Query 13021 ACAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGt---ttttttCTAT 13077
| |||||| |||| || || || | || || || |||| ||| ||| ||
Sbjct 352 AGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCC---AAGAAGTATCTTTGTTCAAT 408
Query 13078 ATCAACTGCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGAT----A 13133
|| || || ||| | || || | | | | ||| | || || |||| | |
Sbjct 409 TTCCACAGCCTCGGTGACAATTTTT-TCA--ACGATGGCTGGGTCTGG-TTTGTTCTTCA 464
Query 13134 GATGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCT 13193
||| |||| || |||||||| || |||||| ||||| ||||||| || | |
Sbjct 465 AATGGGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATT 524
Query 13194 CGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAA 13253
|||| ||||| |||| ||| ||||| | |||| |||||| | ||| || || | ||||
Sbjct 525 CGTTGGAAAAGGTTAAACCGGGCATCATACCTCTTTTTTTCAACCAGAAAATGGAGGCAA 584
Query 13254 ACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACG 13313
| ||||| || ||||| | ||||||| | ||||| || | | ||||||||| ||
Sbjct 585 AGGAACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACA 644
Query 13314 TACTATTTTTACTCTCTA-TCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTC 13372
| | ||| | |||| || ||||| | || || | || | |||
Sbjct 645 -AGGCGTCAGCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTC----ACCGATTTC 699
Query 13373 ----ATATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGT 13428
|| | | || || || || || | | |||| ||| ||| || |||||
Sbjct 700 TGGGATGGTGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGT 759
Query 13429 ATCTATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATA 13488
||| ||||| ||| || |||| || ||||||||||| ||| ||||||||||| ||
Sbjct 760 ATCGATCAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTA 819
Query 13489 AAAACATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTT 13548
|||| | ||||||| | || ||||||| | | || |||| | |||||||| ||
Sbjct 820 GAAACTCTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATT 879
Query 13549 AACTATCCCGTCACTAGCAGCaaaaaaaGCAAG---TATGTGCTTAATAAAt---ttttt 13602
||| || |||||| ||| || ||||| ||||| | || | | |||| | ||
Sbjct 880 AACAATACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTT 939
Query 13603 ttCGTT--TTCTGACAACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCA 13660
||||| ||||| || ||| || | | ||| || || ||||| | || |||
Sbjct 940 CTCGTTCATTCTG-----TTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCA 994
Query 13661 ACGGTCCAAAAAGAAGC 13677
||||||| ||||||||
Sbjct 995 GCGGTCCAGAAAGAAGC 1011
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430957670768616
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |