Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177915.1_202017-04- 25] 4,708 sequences; 12,504,838 total letters Query= NC_009816.1 Length=70579 Score E Sequences producing significant alignments: (Bits) Value seq2402 158 5e-34 seq3562 154 7e-33 >seq2402 Length=579 Score = 158 bits (174), Expect = 5e-34 Identities = 288/417 (69%), Gaps = 10/417 (2%) Strand=Plus/Minus Query 58400 GCAGCTTAGGCAACCTTCCACTTCCGTGCCTTCTA---CCGACTTAGCAGAGGTTCGGAT 58456 |||||| | |||||| || || |||||||| || | || || | | |||| ||||| Sbjct 503 GCAGCTGACGCAACCCTCGACCTCCGTGCCCTCCAGGGCCATCTGA-CGGAGG--CGGAT 447 Query 58457 GTAGTACAGAGACTTCAGGCCCTTCTTGTGAGCGTAGATCTGCGCTCGGTTAATGTCTCG 58516 |||||| || | ||| | |||||| |||||||||||||| ||||| | ||| || Sbjct 446 GTAGTAGAGCGTCTTGATGCCCTTGCGCCACGCGTAGATCTGCGCGCGGTTGACGTCGCG 387 Query 58517 CGTTGTCGCTGTATCTGGGAAGAACAGCGTGAGAGACATGCCCTGGTCTACCCAAGGAGA 58576 ||| || | || || ||||||||||||||| || |||||||| || | | Sbjct 386 CGTCGTGACCGTGTCCTTGAAGAACAGCGTGAGGCTCAGACCCTGGTCGACGTGCTGCGT 327 Query 58577 TGCTACAGCGTACATATCAATGATCGGGT--TAGGTCCGATAGCGTAAGCGCTATCAATT 58634 || | |||||| | || |||||| | ||| ||||| |||| ||| || Sbjct 326 CGCGGCGGCGTACGTGTCGATGATCTTCTCGTAG--CCGATCTCGTACGCGTCCTCGTAG 269 Query 58635 GATTCTACATTCTCATTGGTCACTCCGTACTGAGGGTAATAGACTCGACCAAGCTTACCC 58694 | || | || || || |||| | | ||||| ||||| || || | ||| ||| Sbjct 268 TACTCGAGGTTGTCGTTCGTCAGGTAGGGCGCCGGGTAGTAGACGCGCCCGATCTTGCCC 209 Query 58695 TCCTTGCGAACCTCAACAGGAGAGGTCACAGGGTGAATCGAGGCCGTGGCATGGTTAATG 58754 |||||||| | ||| | || | ||| ||||| ||||||| ||| | | ||| ||| Sbjct 208 TCCTTGCGGATCTCGATCTTCGACGGCACCGGGTGGATCGAGGACGTCGAGTTGTTGATG 149 Query 58755 TACGAGATAGAGCCGGTTGGTGGGATCGCCTGGAGGTTCTGGTTGTAAATACCATGC 58811 || ||||| ||||| || || |||| |||||||||||||||||||| || || ||| Sbjct 148 TAGGAGATCGAGCCCGTCGGCGGGACGGCCTGGAGGTTCTGGTTGTAGATCCCGTGC 92 >seq3562 Length=704 Score = 154 bits (170), Expect = 7e-33 Identities = 198/273 (73%), Gaps = 0/273 (0%) Strand=Plus/Minus Query 60023 GTCGTACATCTCGGTTACGGAGAACTCGGACAGTGACTTTCCGTACACCTTATTGATGTC 60082 ||||||| ||||||| | |||| |||| | | ||| ||||| || | || ||| Sbjct 289 GTCGTACTTCTCGGTGATCGAGATGTCGGCGAACGGCTTGCCGTAGACGCGCTCGACGTC 230 Query 60083 ATAAGGAGAGAATAGGGCCATAGGCTCGCTCTCCTTGGCAAGGCGGAACGTGACATCAGG 60142 || || ||||| ||| ||| |||| ||| ||| || || |||||||| || || Sbjct 229 GTACGGCGAGAAGAGGTACATGTCCTCGTTCTTCTTCGCGAGCTCGAACGTGATGTCCGG 170 Query 60143 AACGATAACTCCTAGGGAGAGAGTCTTAATACGGATCTTCTCGTCGGCGTTTTCACGCTT 60202 | | || || || || || ||||| || |||||||||||||| ||||| || ||||| Sbjct 169 GATCACGACGCCGAGCGACAGCGTCTTGATGCGGATCTTCTCGTCCGCGTTCTCGCGCTT 110 Query 60203 GGTATCCAGGAACGCAAGGATGTCGGGGTGGTGTGCGTTCAAATATACCGCCCCTGCGCC 60262 ||| || |||||| | ||||||||||||||| |||| || || || || || ||||| Sbjct 109 GGTGTCGAGGAACCGCATGATGTCGGGGTGGTGCGCGTGCAGGTACACGGCACCGGCGCC 50 Query 60263 CTGCCTTGCACCCAGTTGGTTAGAGTAGGAGAA 60295 ||| | || || || ||||| | ||||||||| Sbjct 49 CTGGCGCGCGCCGAGCTGGTTCGCGTAGGAGAA 17 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 225715048009520