Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177915.1_202017-04-
25] 4,708 sequences; 12,504,838 total letters
Query= NC_011055.1
Length=76312
Score E
Sequences producing significant alignments: (Bits) Value
seq1228 246 1e-60
seq2953 87.8 9e-13
>seq1228
Length=733
Score = 246 bits (272), Expect = 1e-60
Identities = 404/593 (68%), Gaps = 38/593 (6%)
Strand=Plus/Minus
Query 65314 CAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAG 65373
||||||||||| || |||||||| || |||||| ||| | || || || |||| |
Sbjct 731 CAGCCGGACACGGGGGAGCAGGCGCTCGAGATCACGGACATGCTGATCCGCTCGGGCGCG 672
Query 65374 CTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGC 65433
|| |||| ||||| | ||||| || |||||||| ||||| || ||| |||| |||
Sbjct 671 CTCGACATCATCGTCATCGACTCCGTCGCGGCCCTCGTGCCCAAGGCGGAGATCGAGGGC 612
Query 65434 GACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAG 65493
|| || || ||||| |||||||| || || || ||||||||||||||||| ||||||||
Sbjct 611 GAGATGGGCGACAGCCACGTCGGTCTCCAGGCCCGCCTCATGTCGCAGGCGCTGCGCAAG 552
Query 65494 CTCACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAG 65553
|||| || | || | || |||| | ||| |||||||| | ||||||
Sbjct 551 ATCACCGGTGCGCTCAGCGCGTCCGGCACGACCGCCATCTTCATCAACCAGCTCCGCGAG 492
Query 65554 AAGATCGGCAACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGG 65613
|||||||| |||| || |||| | |||||| || || || |||||||| ||| |
Sbjct 491 AAGATCGG---CGTGTTCTTCGGCTCTCCCGAGACGACGACCGGTGGCAAGGCGCTGAAG 435
Query 65614 TTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGC------ 65667
||||||||||| ||||| | || |||| ||||||| ||| ||||| |||
Sbjct 434 TTCTACGCCTCGGTCCGTCTCGACATCCGCCGCATCGAGACCCTCAAGGAGGGCANNNNN 375
Query 65668 -----------------------------GATGAGGCTGTCGGCAACCGCACCCGGGTGA 65698
| || ||||||||||| ||||| ||||
Sbjct 374 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGCGGTCGGCAACCGGACCCGCGTGA 315
Query 65699 AGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACG 65758
||||||||||||||||| |||| |||||| | | ||||||||| | || | ||||
Sbjct 314 AGGTCGTCAAGAACAAGATGGCGCCGCCGTTCAAGCAGGCCGAGTTCGACATCCTCTACG 255
Query 65759 GGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGTGTCGCAGGGCCTGGTGA 65818
||| |||||||| || |||| | ||| ||||| ||| |||| ||| || | |||
Sbjct 254 GGGTCGGCATCTCCCGCGAGGGTGGCCTCATCGACATGGGCGTGGAGCACGGGTTCGTGC 195
Query 65819 AGAAGTCGGGCGCCTGGTTCAAGTACGGGGACAAGAACGTCGCTCAGGGCAAG 65871
||||| || | ||||||| ||||| | | | | ||| |||||||||
Sbjct 194 GCAAGTCCGGGTCGTGGTTCACCTACGGCGGCGACCAGCTCGGGCAGGGCAAG 142
>seq2953
Length=185
Score = 87.8 bits (96), Expect = 9e-13
Identities = 130/184 (71%), Gaps = 13/184 (7%)
Strand=Plus/Minus
Query 59001 GTCGCCAACTTCACCGTCGTGTCCAACGAACGCCGCCG-----CGACGCCCAGGGCAAC- 59054
|| ||||||||||| || | ||||| |||||| | |||| |||| |||
Sbjct 183 GTGGCCAACTTCACGGTGGCGTCCA-----CGCCGCGGACCTTCGACCGCCAGTCGAACG 129
Query 59055 --TGGGTCGACGGCGACGCCACATTCCTCCGCTGCACCATCTGGCGCGACGCCGCCGAGA 59112
||| ||||| ||| || ||| | |||||| | ||||||||||| ||||| ||||
Sbjct 128 AGTGGAAGGACGGGGACACCCTGTTCATGCGCTGCTCGATCTGGCGCGAGGCCGCGGAGA 69
Query 59113 ACGTGGCGGAAAGCCTCCAGAAAGGCCAGCGCGTCATCGTGCATGGCTACCTCAAGCAGC 59172
|||| ||||| || ||| ||| ||||||||||||||| ||| |||| ||||
Sbjct 68 ACGTCGCGGAGTCGCTGACGAAGGGCATGCGCGTCATCGTGCAGGGCCGCCTCGTCCAGC 9
Query 59173 GCTC 59176
||||
Sbjct 8 GCTC 5
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 244059595361924
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |