Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177915.1_202017-04-
25] 4,708 sequences; 12,504,838 total letters
Query= NC_011056.1
Length=75811
Score E
Sequences producing significant alignments: (Bits) Value
seq1228 235 3e-57
seq2953 87.8 9e-13
>seq1228
Length=733
Score = 235 bits (260), Expect = 3e-57
Identities = 404/596 (68%), Gaps = 44/596 (7%)
Strand=Plus/Minus
Query 66147 CAGCCAGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAG 66206
||||| ||||| || |||||||| || |||||| ||| | || || || |||| |
Sbjct 731 CAGCCGGACACGGGGGAGCAGGCGCTCGAGATCACGGACATGCTGATCCGCTCGGGCGCG 672
Query 66207 GTTTCCATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGG 66266
| ||||||||| | ||||| || |||||||| ||||| ||||||| |||| ||
Sbjct 671 CTCGACATCATCGTCATCGACTCCGTCGCGGCCCTCGTGCCCAAGGCGGAGATCGAGGGC 612
Query 66267 GACATCGGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAG 66326
|| || || ||| |||||||| || || |||||||| ||||| ||||| ||||||||
Sbjct 611 GAGATGGGCGACAGCCACGTCGGTCTCCAGGCCCGCCTCATGTCGCAGGCGCTGCGCAAG 552
Query 66327 CTGACCGGCACGATTGCCAGCAC---CAACACGCTCACCCTGTGGGTGAATCAGCTGCGC 66383
| ||||| || | |||| | | |||| | || | | | || ||||| |||
Sbjct 551 ATCACCGGTGCGCT---CAGCGCGTCCGGCACGACCGCCATCTTCATCAACCAGCTCCGC 495
Query 66384 GAGAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACCGGTGGTAAGGCTCTG 66443
|||||||||||| ||| || |||| | ||||| || |||||||| ||||| |||
Sbjct 494 GAGAAGATCGGC---GTGTTCTTCGGCTCTCCCGAGACGACGACCGGTGGCAAGGCGCTG 438
Query 66444 CGCTTCTACGCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAAGGAAGGC--- 66500
|||||||||||||| ||| | || ||||| | |||| ||| ||||| |||
Sbjct 437 AAGTTCTACGCCTCGGTCCGTCTCGACATCCGCCGCATCGAGACCCTCAAGGAGGGCANN 378
Query 66501 --------------------------------GATGAGGCTGTCGGCAACCGCACGCGCG 66528
| || ||||||||||| || ||||
Sbjct 377 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGCGGTCGGCAACCGGACCCGCG 318
Query 66529 TGAAGGTTGTCAAGAACAAGCTGGCGCCTCCGCACCGCCAGGCTGAGTTTTCCATCGTCT 66588
||||||| |||||||||||| ||||||| ||| | ||||| ||||| |||| |||
Sbjct 317 TGAAGGTCGTCAAGAACAAGATGGCGCCGCCGTTCAAGCAGGCCGAGTTCGACATCCTCT 258
Query 66589 ACGGCGAGGGCATTTCCCGCGAGGCTGAACTCCTCGACATGGCCGTTTCCCGAGGGCTCA 66648
|||| | ||||| |||||||||| || ||| ||||||||| ||| | ||| ||
Sbjct 257 ACGGGGTCGGCATCTCCCGCGAGGGTGGCCTCATCGACATGGGCGTGGAGCACGGGTTCG 198
Query 66649 TCAAGAAGTCTGGGGCCTGGTTCAAGTACGGGGACAAGAACATCGGCCAGGGCAAG 66704
| ||||| ||| | ||||||| ||||| | | | | |||| |||||||||
Sbjct 197 TGCGCAAGTCCGGGTCGTGGTTCACCTACGGCGGCGACCAGCTCGGGCAGGGCAAG 142
>seq2953
Length=185
Score = 87.8 bits (96), Expect = 9e-13
Identities = 130/184 (71%), Gaps = 13/184 (7%)
Strand=Plus/Minus
Query 59357 GTCGCCAACTTCACCGTCGTGTCCAACGAACGCCGCCG-----CGACGCCCAGGGCAAC- 59410
|| ||||||||||| || | ||||| |||||| | |||| |||| |||
Sbjct 183 GTGGCCAACTTCACGGTGGCGTCCA-----CGCCGCGGACCTTCGACCGCCAGTCGAACG 129
Query 59411 --TGGGTCGACGGCGACGCCACATTCCTCCGCTGCACCATCTGGCGCGACGCCGCCGAGA 59468
||| ||||| ||| || ||| | |||||| | ||||||||||| ||||| ||||
Sbjct 128 AGTGGAAGGACGGGGACACCCTGTTCATGCGCTGCTCGATCTGGCGCGAGGCCGCGGAGA 69
Query 59469 ACGTAGCGGAAAGCCTCCAGAAAGGCCAGCGCGTCATCGTGCATGGCTACCTCAAGCAGC 59528
|||| ||||| || ||| ||| ||||||||||||||| ||| |||| ||||
Sbjct 68 ACGTCGCGGAGTCGCTGACGAAGGGCATGCGCGTCATCGTGCAGGGCCGCCTCGTCCAGC 9
Query 59529 GCTC 59532
||||
Sbjct 8 GCTC 5
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 242456487351536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |