Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177915.1_202017-04-
25] 4,708 sequences; 12,504,838 total letters
Query= NC_011273.1
Length=164602
Score E
Sequences producing significant alignments: (Bits) Value
seq731 340 2e-88
seq704 197 1e-45
seq334 176 5e-39
seq267 82.4 8e-11
>seq731
Length=840
Score = 340 bits (376), Expect = 2e-88
Identities = 295/365 (81%), Gaps = 6/365 (2%)
Strand=Plus/Minus
Query 156269 ACGCCGCGTTCCGCTGGTCGGAGGAGAACGCCAACCTGCAGAAGAAGGCTGAGATCGTGC 156328
||| ||||||||||||||||||||||||| | ||||| ||| ||||| ||||||||
Sbjct 362 ACGACGCGTTCCGCTGGTCGGAGGAGAACCCGAACCTCCAGCGCAAGGCCGAGATCGTCA 303
Query 156329 TCAGCTACTACAACGGTGACGACCCGCTCAAGCGCAAGGTCGCCTCCACGCTGCTGGAGG 156388
| ||||||||| || ||| |||||||||||||||||||| ||||||||| |||
Sbjct 302 TGGACTACTACAAGGGCGACTCGCCGCTCAAGCGCAAGGTCGCGAGCACGCTGCTCGAGT 243
Query 156389 GCTTCCTGTTCTACAGCGGCTTCTACCTGCCGATGTTCTGGTCGTCGCGAGGCAAGCTCA 156448
||||| |||||| |||||||||||||||||||| |||||||||||| | |||||| |
Sbjct 242 CATTCCTCTTCTACTCCGGCTTCTACCTGCCGATGTACTGGTCGTCGCGCGCCAAGCTGA 183
Query 156449 CCAACACCGCCGACATGATCCGGCTCATCATCCGGGACGAGGCCGTGCACGGCTACTACA 156508
| ||||| |||||| | ||||| ||||||||||| ||||||||||||||||| |||||||
Sbjct 182 CGAACACGGCCGACCTCATCCGCCTCATCATCCGCGACGAGGCCGTGCACGGGTACTACA 123
Query 156509 TCGGCTACAAGTTCCAGAAGGGCCTGGAGAAGGAGACC---AAGGCCCGCCAGCAGGAAC 156565
|||||||||||||||||||||| || |||||| || ||| ||| | || |
Sbjct 122 TCGGCTACAAGTTCCAGAAGGGTCTCGAGAAGCTCTCCCCGGAGGAGCGC---GACGAGC 66
Query 156566 TCAAGGACTACACCTATGAGCTGCTGTTCGAGCTGTTCGACAACGAGCAGGAGTACACCC 156625
|||||| ||||| | |||||||| |||||||||| ||| |||||| | |||||||
Sbjct 65 TCAAGGCGTACACGTTCGAGCTGCTCTTCGAGCTGTACGAGAACGAGGTGCAGTACACGG 6
Query 156626 AGGAC 156630
|||||
Sbjct 5 AGGAC 1
Score = 316 bits (350), Expect = 2e-81
Identities = 262/320 (82%), Gaps = 0/320 (0%)
Strand=Plus/Minus
Query 155933 GCGCCATCAACTGGAACCGCGTGATCGACGAGAAGGACGCGGAGGTGTGGAACCGGCTGA 155992
|||| |||||||||||||| | |||||||||||| ||||||||| |||| ||
Sbjct 749 GCGCGATCAACTGGAACCGTCTCGAGGACGAGAAGGACCTCGAGGTGTGGGACCGCCTCG 690
Query 155993 CCAACAACTTCTGGCTGCCGGAGAAGATCCCGGTGTCCAATGACGTCCAGTCGTGGCACC 156052
| |||||||||||||| ||||| | |||||||| || ||| ||||||||||| ||
Sbjct 689 TCGGGAACTTCTGGCTGCCCGAGAAAGTGCCGGTGTCGAACGACATCCAGTCGTGGAACA 630
Query 156053 AGCTGACCGAGGAAGAGCGCCTGATCACCATGCGGGTGTTCACCGGCCTGACGATGCTGG 156112
||| |||| | | |||| | |||| ||||| || ||||||||||||||| ||||||
Sbjct 629 CGCTCACCGCGCAGGAGCAGGAGCTCACGATGCGCGTATTCACCGGCCTGACGCTGCTGG 570
Query 156113 ACACCATCCAGGGCACCGTCGGCGCGGTCTCGCTCATCCCGGACGCCATCACCCCGCACG 156172
|||| ||||||||||| ||||||||||| ||||||||||| ||||| ||||| |||||||
Sbjct 569 ACACGATCCAGGGCACGGTCGGCGCGGTGTCGCTCATCCCCGACGCGATCACGCCGCACG 510
Query 156173 AGGAGGCGGTGTACACCAACATCGCGTTCATGGAGAGCGTGCACGCACGCAGCTACTCGA 156232
|||| |||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 509 AGGAAGCGGTGTACACCAACATCGCGTTCATGGAGTCGGTGCACGCCAAGAGCTACTCGT 450
Query 156233 ACATCTTCTCGACGCTGTGC 156252
||||||||||||||||||
Sbjct 449 CGATCTTCTCGACGCTGTGC 430
>seq704
Length=204
Score = 197 bits (218), Expect = 1e-45
Identities = 166/204 (81%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 153002 CGAGGGCGAGGGCGTAGCCGCCAAGGCGCTGCAGGCGCTCGACATCAACCTGGAGGAGGT 153061
|||||||||||| || || |||||||||||| || | |||| ||| ||| || | ||
Sbjct 1 CGAGGGCGAGGGTGTCGCGGCCAAGGCGCTGGAGTCCCTCGGGATCTCCCTCGACGGCGT 60
Query 153062 GCGTGCCGAGGTCGAGGAGATCATCGGCCACGGCCAGCAGGCACCCACCGGGCACATCCC 153121
|| || |||| |||||||||||| | ||||||||||| || | ||||||||||||
Sbjct 61 CCGCACCCAGGTGACCGAGATCATCGGCGAGGGCCAGCAGGCCCCGAGCGGGCACATCCC 120
Query 153122 GTTCACCGACCGCTCCAAGCGCGTCCTGGAGCTGTCGCTGCGCGAGGCGCTGCAGCTCGG 153181
|||||| ||| ||||| || || ||||||||||||||||||||||| ||||||||
Sbjct 121 GTTCACGCCGCGCGCCAAGAAGGTGCTCGAGCTGTCGCTGCGCGAGGCGCTCCAGCTCGG 180
Query 153182 CCACAACTACATCGGCACCGAGCA 153205
||||||||||||||||||||||||
Sbjct 181 CCACAACTACATCGGCACCGAGCA 204
>seq334
Length=244
Score = 176 bits (194), Expect = 5e-39
Identities = 136/162 (84%), Gaps = 0/162 (0%)
Strand=Plus/Minus
Query 153158 GCTGCGCGAGGCGCTGCAGCTCGGCCACAACTACATCGGCACCGAGCATCTCCTGCTGGC 153217
||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |
Sbjct 244 GCTGCGCGAGGCGCTCCAGCTCGGCCACAACTACATCGGCACCGAGCACATCCTGCTCGG 185
Query 153218 CCTGATCCGCGAGGGTGAGGGCGTGGGCTGCCAGGTGCTGGTGAAGCGCGGCGCGGAGCT 153277
||| ||||||||||| |||||||| | | |||||| ||| |||| ||||| || ||
Sbjct 184 CCTCATCCGCGAGGGCGAGGGCGTCGCCGCCCAGGTCCTGACGAAGATGGGCGCCGACCT 125
Query 153278 GACCAAGGTCCGCCAGGTGGTCATCCAGCTGCTGTCCGGGTA 153319
| |||||| |||||| |||||||||||| |||||||| ||
Sbjct 124 CAACAAGGTGCGCCAGCAGGTCATCCAGCTCCTGTCCGGCTA 83
>seq267
Length=224
Score = 82.4 bits (90), Expect = 8e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 92615 GCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTCAAAT 92674
||||||| ||||||||||||||||||| ||||||||||| |||| || |||||||||
Sbjct 97 GCGGGGTGGAGCAGCTCGGTAGCTCGCTGGGCTCATAACCCAGAGGTCGCAGGTTCAAAT 38
Query 92675 CCCACTCCCGCCACT 92689
|| | ||||| |||
Sbjct 37 CCTGCCCCCGCTACT 23
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 526567409684160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |