Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177915.1_202017-04- 25] 4,708 sequences; 12,504,838 total letters Query= NC_019544.1 Length=49335 Score E Sequences producing significant alignments: (Bits) Value seq783 95.1 4e-15 seq4361 82.4 2e-11 >seq783 Length=334 Score = 95.1 bits (104), Expect = 4e-15 Identities = 142/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 45521 GTGTTCGGCCGTCAGCTGCGCTTTAACTTGCAGGACGGATTCCCGCTCGTGACGACGAAA 45580 ||||||||||| ||||| ||||| || | | | || ||||||||| | |||||||| Sbjct 204 GTGTTCGGCCGCCAGCTCCGCTTCGACCTCGCGCAGGGCTTCCCGCTCATCACGACGAAG 145 Query 45581 AAGTTGCATATCCGCTCGATCATTTATGAACTGCTCTGGTTTTTAAAAGGCGATACGAAT 45640 |||| || || || || || ||||| ||||| | ||||| |||| Sbjct 144 CGCGTGCACCTCAAGTCCGTCGCCTACGAGCTGCTGTGGTTCCTGCGCGGCGACTCGAAC 85 Query 45641 GTTCGCTATTTGCAGGAGAATGGTGTGACGATTTGGGACGAGTGGGCCGATGAAAACGGC 45700 || |||| | |||||| || ||| || ||||||||||||||||| | ||||| Sbjct 84 GTGCGCTGGCTCCAGGAGCGCGGCGTGCGCATCTGGGACGAGTGGGCCGACGCCGACGGC 25 Query 45701 GATCTCGGCCCAATCTACGGCG 45722 || |||||||| ||||||||| Sbjct 24 GAGCTCGGCCCCGTCTACGGCG 3 >seq4361 Length=321 Score = 82.4 bits (90), Expect = 2e-11 Identities = 199/300 (66%), Gaps = 6/300 (2%) Strand=Plus/Plus Query 45829 CGCGTGGAACGTGGCAAAGTTGGGGGAAATGAAGTTGCCCCCATGTCATTACGC---CTT 45885 |||||||||||| | || | | ||| ||| | |||| || || | |||| ||| Sbjct 7 CGCGTGGAACGTCGGGGAGATCGAGGACATGGCGCTGCCGCCGTGCC---ACGCGTTCTT 63 Query 45886 TCAGTTTTACGTCGCGAATGGCCGGTTGTCATGCATGTGGCAACAGCGTTCTGTCGATAC 45945 ||||| ||||| || | |||||| | || ||| | | ||||| || | || Sbjct 64 CCAGTTCTACGTGGCCGACGGCCGGCTCTCGTGCCAGCTCTACCAGCGCTCGGCGGACCT 123 Query 45946 ATTTCTAGGATTGCCGTTTAACATCGCTAGCTATGCGCTGTTGACACATATGGTTGCCCA 46005 || || || ||||||| |||||||| || |||||| | || ||||| ||| Sbjct 124 CTTCCTCGGGGTGCCGTTCAACATCGCGTCGTACGCGCTGCTCGTCCACATGGTCGCCGC 183 Query 46006 ACAATGCGACCTCGATGTCGGCGAACTCATTTTCACCGGCGGCGACGTCCATTTGTACAA 46065 || || |||||| |||||||| || | | ||||| |||||||| || | ||| | Sbjct 184 GCAGACCGGCCTCGAGGTCGGCGACTTCGTGTGGACCGGAGGCGACGTGCACATCTACGA 243 Query 46066 AAATCATCTGGAACAAGCGAAACTGCAGCTGACGCGCGAGCCGCGCCCGCTGCCGAAGCT 46125 || || | || || | | |||||| |||||||||||| |||| |||| ||| Sbjct 244 CAACCACGTCGAGCAGGTGCGCGAGCAGCTCACGCGCGAGCCGTACCCGTACCCGACGCT 303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157741580569512