Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177915.1_202017-04- 25] 4,708 sequences; 12,504,838 total letters Query= NC_021298.1 Length=51252 Score E Sequences producing significant alignments: (Bits) Value seq2584 480 3e-131 seq752 197 5e-46 seq710 141 3e-29 seq362 86.0 2e-12 seq4528 80.6 9e-11 >seq2584 Length=593 Score = 480 bits (532), Expect = 3e-131 Identities = 461/591 (78%), Gaps = 0/591 (0%) Strand=Plus/Minus Query 39532 CGAACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATCGCCCGGCGAAGCAGGTCGG 39591 ||||||||||| | || | ||| |||||||||||||||||| || || |||||||||| Sbjct 593 CGAACTCCTTGTCGAGGATCTCCTTCTTCTTCTTGCCCATCGCGCGCCGCAGCAGGTCGG 534 Query 39592 CCTGACCGAGGGTGTACCCGGCCATGACCTGCGCAACCTTCTGCACCTGCTCCTGGTAGA 39651 |||| ||||| | ||||||||| | || |||||| || |||| |||||||||||||||| Sbjct 533 CCTGTCCGAGCGAGTACCCGGCGAGGATCTGCGCGGCCCTCTGGACCTGCTCCTGGTAGA 474 Query 39652 TGATGAGCTGGAAGGTCGGGTCCAGGATCTCCGACAGGGACTCGGCCACCTCGGGGTGGA 39711 |||||| | ||||| ||| |||||||||| |||| || | | ||| ||||||| Sbjct 473 CGATGAGGCCGTAGGTCTCGTCGAGGATCTCCGCGAGGGGCTGCTCGAGCTCCGGGTGGA 414 Query 39712 TCGGCGTGATCGCCTGCTGCCCGTTCTTACGGAGGGCGTAGTTCGTGTGAGACCCCACGC 39771 | ||| |||| |||| |||||||||| || || |||||||||||||| || || || Sbjct 413 TGGGCTCGATCTTCTGCAGCCCGTTCTTGCGCAGCGCGTAGTTCGTGTGCGAGTTCATGC 354 Query 39772 CCATCGGACCCGGACGGTACAGCGCGACGACGGCCGAGATGTCCTCGAAGTTGTCCGGCT 39831 ||||||| ||||| ||||||||||||| ||||||||||| ||| ||||| |||||||||| Sbjct 353 CCATCGGGCCCGGGCGGTACAGCGCGATGACGGCCGAGAGGTCGTCGAACTTGTCCGGCT 294 Query 39832 TCAGCAGACGGAGCAGTGAGCGCATCGCGCCGCCGTCGAGCTGGAAGACCGAGAGCGTGT 39891 ||| | | || || || | |||||| | |||||||||||||||||| || |||||||| Sbjct 293 TCATCTGGCGCAGGAGCGCGCGCATGGGGCCGCCGTCGAGCTGGAACACGCCGAGCGTGT 234 Query 39892 CGCCCCTGGCCAGCAGCTCGTACGTCGCGGGGTCGTCCAGGGGGATGTTCTCCAGGTCGA 39951 | || | || ||||||||||||| ||| |||||| || | || ||| | |||| Sbjct 233 CACCGCGCGCGAGCAGCTCGTACGACGCCTTGTCGTCGAGCGTGAGCGACTCGATCTCGA 174 Query 39952 CGTGCTCCCCACGGTTGAGGCGGATGTTCTCGACCGCGTCGCCCATGATCGTGAGGTTCC 40011 ||||| | ||| | ||||||||||| ||||||| | | |||||||||||||| Sbjct 173 TCGGCTCCTTGCCGTTCATCTCGATGTTCTCGAGCGCGTCGTCGAGGATCGTGAGGTTCC 114 Query 40012 GGAGCCCGAGGAAGTCCATCTTCAGCAGGCCCAGAGCCTCGCAGCTCGGGTAGTCGAACT 40071 | |||||||||||||||||||| | ||||| || ||||| | ||||||||||||||| Sbjct 113 GCAGCCCGAGGAAGTCCATCTTGATGAGGCCGAGGCCCTCGGACGTCGGGTAGTCGAACT 54 Query 40072 GCGTGATCGTCGCGCCGTCCTGCGGTCGCACCCACACCGGGATGTGGTCGA 40122 | ||||| |||||||||||| || || | | ||||||| ||||| Sbjct 53 GGGTGATGACCGCGCCGTCCTGAGGACGGCGCATGATCGGGATGATGTCGA 3 >seq752 Length=287 Score = 197 bits (218), Expect = 5e-46 Identities = 199/256 (78%), Gaps = 2/256 (1%) Strand=Plus/Minus Query 39257 CACGTCGGGCGGCAGGACCCGAAGGCCCATGCGCCGAGACTCGCCGAGGTACGTGGCCAT 39316 |||||| ||||| || || | | ||||||||| ||||| |||||| ||||| Sbjct 260 CACGTCCGGCGGGAGCACGGTGATGTGCATGCGCCGGCACTCGTTGAGGTAGAGGGCCAG 201 Query 39317 CTTGTTCTTGTCGTCGCCCACCGAGGTG-AGCGCAGCCGCCATGTACTCGGCTGGGTAGT 39375 ||||| ||||||||||| ||| | || || |||||||||||||| | ||||||| Sbjct 200 CTTGTCCTTGTCGTCGCGCAC-GCTCTGCAGGAGCGCCGCCATGTACTCCGTCGGGTAGT 142 Query 39376 GCGTCTTCAGCCACGCCGTGCGGTACGCGATGAGTCCGTACGCCGCCGAGTGCGCCTTGT 39435 || ||| || ||||||| | |||||| | ||| |||||| | || ||||||||||||| Sbjct 141 TCGCCTTGAGGAACGCCGTCCAGTACGCCACGAGGCCGTACCCGGCGGAGTGCGCCTTGT 82 Query 39436 TGAAGGCGTAGCCAGCGAACGGGACCAGCACGTCCCACACTGCCTGGATGGCACCGTCCG 39495 ||||||||||||| ||||||||||||||| |||||| || |||||||| || |||| | Sbjct 81 TGAAGGCGTAGCCCGCGAACGGGACCAGCGTGTCCCAGACCGCCTGGATCGCGGCGTCGG 22 Query 39496 AGTAGCCTCGCTCGCG 39511 |||| || ||||| || Sbjct 21 AGTACCCGCGCTCCCG 6 >seq710 Length=223 Score = 141 bits (156), Expect = 3e-29 Identities = 163/218 (75%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 40617 GAACCGGCCGCAGAGCCTCGCCCAGGGCCGACCCAGACGCCGTTCTCCTTCGCCCAGCGG 40676 || || || || ||||| || || |||||||| | || ||| | ||||| |||||| | Sbjct 8 GAGCCCGCGGCCGAGCCACGGCCCGGGCCGACGCGGATGCCCTGGTCCTTGGCCCAGTTG 67 Query 40677 ATGAAGTCCGCGACGACGAGGAAGTACGACGGGAAGCCCATCTGGATGATCATGTCGATC 40736 |||||||| ||||| |||||||||||| ||||||||||||||||||||| | ||| || Sbjct 68 ATGAAGTCGGCGACCACGAGGAAGTACCCCGGGAAGCCCATCTGGATGATGACCTCGGTC 127 Query 40737 TCGTACTGGAGCTGCTTGCCGTGCTCGTAGTCCG---TGCCGTTCGGGTACCGACGACGC 40793 |||||||| |||||||| || | ||||| ||||||| |||||||| || || Sbjct 128 TCGTACTGCGCCTGCTTGC---GCGCCGCGTCCGGGATGCCGTTGGGGTACCGGCGGTGC 184 Query 40794 GCGCCTCGGGCGACCTCGTCCTCGAACCAGGTGATCTC 40831 || || | ||||| | |||||||| | |||| Sbjct 185 AGCCCGCGCTCCACCTCCTTGACGAACCAGCTCGTCTC 222 >seq362 Length=717 Score = 86.0 bits (94), Expect = 2e-12 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 38825 CTCCAGCCCGGCGAGCGGGTGGTCGGAGACGTACAGGCCCAGCATCTCCCGCTCGATGGA 38884 ||| ||||||| |||||||||||||||||||||||||| |||||||| ||||||| | Sbjct 207 CTCGAGCCCGGACAGCGGGTGGTCGGAGACGTACAGGCCGAGCATCTCGCGCTCGAACGC 148 Query 38885 GAGACGCGGACCCTTCGCCCAGTCC 38909 ||| ||| | ||| |||||||| Sbjct 147 GAGGCGCTGCTTCTTGTCCCAGTCC 123 >seq4528 Length=228 Score = 80.6 bits (88), Expect = 9e-11 Identities = 123/173 (71%), Gaps = 2/173 (1%) Strand=Plus/Plus Query 40426 TCGCGATCTGCGCGACCTTGTCGGCCCCGTACTTCCGGGTGACGTACTGGATCACCTCGC 40485 |||||| ||||||| | | | |||| || || | ||||| |||||| ||||| Sbjct 57 TCGCGACCTGCGCGGCGTGCGTGCGCCCGAACGTCTCGTAGACGTGCTGGATGACCTCCT 116 Query 40486 CACGACGC-CGGTCATCGAAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTC 40544 | || ||| | | | |||| ||||||||||| || ||| | ||||||||||| Sbjct 117 CGCGCCGCGCCGAC-TCGATGTCGATGTCGATGTCCGGCGGGCCGTCGCGCTCGGGGGCG 175 Query 40545 AGGAACCGCTCGAAGATGAGTCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCC 40597 ||||| |||||||| | || ||||||| || || ||||| | | ||||| || Sbjct 176 AGGAAGCGCTCGAACAGCAGGCCGTGCTTCACCGCGTCGACGGCCGTGATGCC 228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163875637610544