Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177915.1_202017-04- 25] 4,708 sequences; 12,504,838 total letters Query= NC_021299.1 Length=80955 Score E Sequences producing significant alignments: (Bits) Value seq731 318 3e-82 >seq731 Length=840 Score = 318 bits (352), Expect = 3e-82 Identities = 290/361 (80%), Gaps = 10/361 (3%) Strand=Plus/Minus Query 59605 GCGTTCCGCTGGTCGGAGGAGAATCCGAACCTGCAACGCAAGGCTCAGATCGTCCTGGAC 59664 ||||||||||||||||||||||| |||||||| || |||||||| |||||||| ||||| Sbjct 357 GCGTTCCGCTGGTCGGAGGAGAACCCGAACCTCCAGCGCAAGGCCGAGATCGTCATGGAC 298 Query 59665 TACTACCAGGGTGACGATCCGCTGAAGCGGAAGGTGGCCTCGACGTTGCTGGAGGGGTTC 59724 |||||| |||| ||| ||||| ||||| ||||| || ||| |||| ||| ||| Sbjct 297 TACTACAAGGGCGACTCGCCGCTCAAGCGCAAGGTCGCGAGCACGCTGCTCGAGTCATTC 238 Query 59725 CTGTTCTACTCGGGCTTCTACCTGCCGATGTACTGGTCTAGTCGGGGG--AAGCTGACGA 59782 || |||||||| |||||||||||||||||||||||||| |||| | | |||||||||| Sbjct 237 CTCTTCTACTCCGGCTTCTACCTGCCGATGTACTGGTC--GTCGCGCGCCAAGCTGACGA 180 Query 59783 ACACGGCCGACATGATCCGGCTCATCATTCGTGACGAGGCGGTGCACGGCTACTACATCG 59842 ||||||||||| | ||||| |||||||| || |||||||| |||||||| |||||||||| Sbjct 179 ACACGGCCGACCTCATCCGCCTCATCATCCGCGACGAGGCCGTGCACGGGTACTACATCG 120 Query 59843 GATACAAGTTCCAGCGCGGCCTGGAGA--CTCAGAAC-GAGGCTCGCCGCGAGGAGCTGA 59899 | |||||||||||| || || |||| ||| | |||| ||||| ||||| | Sbjct 119 GCTACAAGTTCCAGAAGGGTCTCGAGAAGCTCTCCCCGGAGG---AGCGCGACGAGCTCA 63 Query 59900 AGGACTACACGTACGGTCTGCTACTCGAGTTGTACGACAACGAGATTGAGTACACGCAGG 59959 ||| ||||||| || ||||| ||||| ||||||| |||||| | |||||||| ||| Sbjct 62 AGGCGTACACGTTCGAGCTGCTCTTCGAGCTGTACGAGAACGAGGTGCAGTACACGGAGG 3 Query 59960 A 59960 | Sbjct 2 A 2 Score = 298 bits (330), Expect = 3e-76 Identities = 257/318 (81%), Gaps = 0/318 (0%) Strand=Plus/Minus Query 59266 GCCATCAACTGGAACCGCGTCTTTGACGACAAGGATCTTGAGGTCTGGAACCGGTTGACC 59325 || |||||||||||||| || ||||| ||||| || ||||| ||| |||| | | Sbjct 747 GCGATCAACTGGAACCGTCTCGAGGACGAGAAGGACCTCGAGGTGTGGGACCGCCTCGTC 688 Query 59326 AACAACTTCTGGCTGCCAGAGAAGATCCCTGTCTCCAACGACATCCCGGCCTGGGGCACG 59385 |||||||||||||| ||||| | || || || |||||||||| | | ||| |||| Sbjct 687 GGGAACTTCTGGCTGCCCGAGAAAGTGCCGGTGTCGAACGACATCCAGTCGTGGAACACG 628 Query 59386 CTGACGGAGGAAGAGCAAGTCCTCACGATGCGGGTCTTCACCGGCCTGACGATGCTCGAC 59445 || || | | | ||||| | ||||||||||| || ||||||||||||||| |||| ||| Sbjct 627 CTCACCGCGCAGGAGCAGGAGCTCACGATGCGCGTATTCACCGGCCTGACGCTGCTGGAC 568 Query 59446 ACGATCCAGGGCACCGTGGGTGCTGTGAGCCTGATCCCTGACGCGATCACGCCGCACGAG 59505 |||||||||||||| || || || ||| || ||||| ||||||||||||||||||||| Sbjct 567 ACGATCCAGGGCACGGTCGGCGCGGTGTCGCTCATCCCCGACGCGATCACGCCGCACGAG 508 Query 59506 GAGGCGGTGTACACGAACATCGCGTTCATGGAGTCGGTGCACGCGAAGAGCTACAGCAAC 59565 || ||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 507 GAAGCGGTGTACACCAACATCGCGTTCATGGAGTCGGTGCACGCCAAGAGCTACTCGTCG 448 Query 59566 ATCTTCTCGACGCTGTGC 59583 |||||||||||||||||| Sbjct 447 ATCTTCTCGACGCTGTGC 430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 258916342851408