Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177915.1_202017-04-
25] 4,708 sequences; 12,504,838 total letters
Query= NC_021304.1
Length=51552
Score E
Sequences producing significant alignments: (Bits) Value
seq2584 466 6e-127
seq752 197 5e-46
seq710 141 3e-29
seq362 86.0 2e-12
seq1079 84.2 7e-12
seq4528 80.6 9e-11
>seq2584
Length=593
Score = 466 bits (516), Expect = 6e-127
Identities = 458/591 (77%), Gaps = 0/591 (0%)
Strand=Plus/Minus
Query 39820 CGAACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATCGCCCGGCGAAGCAGGTCGG 39879
||||||||||| | || | ||| |||||||||||||||||| || || ||||||||||
Sbjct 593 CGAACTCCTTGTCGAGGATCTCCTTCTTCTTCTTGCCCATCGCGCGCCGCAGCAGGTCGG 534
Query 39880 CCTGACCGAGGGTGTACCCGGCCATGACCTGTGCAACCTTCTGCACTTGCTCCTGGTAGA 39939
|||| ||||| | ||||||||| | || ||| || || |||| || |||||||||||||
Sbjct 533 CCTGTCCGAGCGAGTACCCGGCGAGGATCTGCGCGGCCCTCTGGACCTGCTCCTGGTAGA 474
Query 39940 TGATGAGCTGGAAGGTCGGGTCCAGGATCTCCGACAGGGACTCGGCCACCTCGGGGTGGA 39999
|||||| | ||||| ||| |||||||||| |||| || | | ||| |||||||
Sbjct 473 CGATGAGGCCGTAGGTCTCGTCGAGGATCTCCGCGAGGGGCTGCTCGAGCTCCGGGTGGA 414
Query 40000 TCGGCGTGATCGCCTGCTGCCCGTTCTTCCGGAGGGCGTAGTTCGTGTGAGACCCCACGC 40059
| ||| |||| |||| |||||||||| || || |||||||||||||| || || ||
Sbjct 413 TGGGCTCGATCTTCTGCAGCCCGTTCTTGCGCAGCGCGTAGTTCGTGTGCGAGTTCATGC 354
Query 40060 CCATCGGACCAGGACGGTACAGCGCGACGACGGCCGAGATGTCCTCGAAGTTGTCCGGCT 40119
||||||| || || ||||||||||||| ||||||||||| ||| ||||| ||||||||||
Sbjct 353 CCATCGGGCCCGGGCGGTACAGCGCGATGACGGCCGAGAGGTCGTCGAACTTGTCCGGCT 294
Query 40120 TCAGCAGACGGAGCAGTGAGCGCATCGCGCCGCCGTCGAGCTGGAAGACCGAGAGCGTGT 40179
||| | | || || || | |||||| | |||||||||||||||||| || ||||||||
Sbjct 293 TCATCTGGCGCAGGAGCGCGCGCATGGGGCCGCCGTCGAGCTGGAACACGCCGAGCGTGT 234
Query 40180 CGCCCCTGGCCAGCAGCTCGTACGTCGCGGGGTCGTCCAGGGGGATGTTCTCCAGGTCGA 40239
| || | || ||||||||||||| ||| |||||| || | || ||| | ||||
Sbjct 233 CACCGCGCGCGAGCAGCTCGTACGACGCCTTGTCGTCGAGCGTGAGCGACTCGATCTCGA 174
Query 40240 CGTGCTCCCCACGGTTGAGGCGGATGTTCTCGACCGCGTCGCCCATGATCGTGAGGTTCC 40299
||||| | ||| | ||||||||||| ||||||| | | ||||||||||||||
Sbjct 173 TCGGCTCCTTGCCGTTCATCTCGATGTTCTCGAGCGCGTCGTCGAGGATCGTGAGGTTCC 114
Query 40300 GGAGCCCGAGGAAGTCCATCTTCAGCAGGCCCAGAGCCTCGCAGCTCGGGTAGTCGAACT 40359
| |||||||||||||||||||| | ||||| || ||||| | |||||||||||||||
Sbjct 113 GCAGCCCGAGGAAGTCCATCTTGATGAGGCCGAGGCCCTCGGACGTCGGGTAGTCGAACT 54
Query 40360 GCGTGATCGTCGCGCCGTCCTGCGGCCGAACCCACACCGGGATGTGGTCGA 40410
| ||||| |||||||||||| || || | | ||||||| |||||
Sbjct 53 GGGTGATGACCGCGCCGTCCTGAGGACGGCGCATGATCGGGATGATGTCGA 3
>seq752
Length=287
Score = 197 bits (218), Expect = 5e-46
Identities = 199/256 (78%), Gaps = 2/256 (1%)
Strand=Plus/Minus
Query 39545 CACGTCGGGCGGCAGGACCCGCAGGCCCATGCGCCGAGACTCGCCGAGGTACGTGGCCAT 39604
|||||| ||||| || || | | ||||||||| ||||| |||||| |||||
Sbjct 260 CACGTCCGGCGGGAGCACGGTGATGTGCATGCGCCGGCACTCGTTGAGGTAGAGGGCCAG 201
Query 39605 CTTGTTCTTGTCGTCGCCCACCGAGGTG-AGCGCAGCCGCCATGTACTCGGCTGGGTAGT 39663
||||| ||||||||||| ||| | || || |||||||||||||| | |||||||
Sbjct 200 CTTGTCCTTGTCGTCGCGCAC-GCTCTGCAGGAGCGCCGCCATGTACTCCGTCGGGTAGT 142
Query 39664 GCGTCTTCAGCCACGCCGTGCGGTACGCGATGAGTCCGTACGCCGCCGAGTGCGCCTTGT 39723
|| ||| || ||||||| | |||||| | ||| |||||| | || |||||||||||||
Sbjct 141 TCGCCTTGAGGAACGCCGTCCAGTACGCCACGAGGCCGTACCCGGCGGAGTGCGCCTTGT 82
Query 39724 TGAAGGCGTAGCCAGCGAACGGGACCAGCACGTCCCACACTGCCTGGATGGCACCGTCCG 39783
||||||||||||| ||||||||||||||| |||||| || |||||||| || |||| |
Sbjct 81 TGAAGGCGTAGCCCGCGAACGGGACCAGCGTGTCCCAGACCGCCTGGATCGCGGCGTCGG 22
Query 39784 AGTAGCCTCGCTCGCG 39799
|||| || ||||| ||
Sbjct 21 AGTACCCGCGCTCCCG 6
>seq710
Length=223
Score = 141 bits (156), Expect = 3e-29
Identities = 163/218 (75%), Gaps = 6/218 (3%)
Strand=Plus/Plus
Query 40905 GAACCGGCCGCAGAGCCTCGCCCAGGGCCGACCCAGACGCCGTTCTCCTTCGCCCAGCGG 40964
|| || || || ||||| || || |||||||| | || ||| | ||||| |||||| |
Sbjct 8 GAGCCCGCGGCCGAGCCACGGCCCGGGCCGACGCGGATGCCCTGGTCCTTGGCCCAGTTG 67
Query 40965 ATGAAGTCCGCGACGACGAGGAAGTACGACGGGAAGCCCATCTGGATGATCATGTCGATC 41024
|||||||| ||||| |||||||||||| ||||||||||||||||||||| | ||| ||
Sbjct 68 ATGAAGTCGGCGACCACGAGGAAGTACCCCGGGAAGCCCATCTGGATGATGACCTCGGTC 127
Query 41025 TCGTACTGGAGCTGCTTGCCGTGCTCGTAGTCCG---TGCCGTTCGGGTACCGACGACGC 41081
|||||||| |||||||| || | ||||| ||||||| |||||||| || ||
Sbjct 128 TCGTACTGCGCCTGCTTGC---GCGCCGCGTCCGGGATGCCGTTGGGGTACCGGCGGTGC 184
Query 41082 GCGCCTCGGGCGACCTCGTCCTCGAACCAGGTGATCTC 41119
|| || | ||||| | |||||||| | ||||
Sbjct 185 AGCCCGCGCTCCACCTCCTTGACGAACCAGCTCGTCTC 222
>seq362
Length=717
Score = 86.0 bits (94), Expect = 2e-12
Identities = 70/85 (82%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 39113 CTCCAGCCCGGCGAGCGGGTGGTCGGAGACGTACAGGCCCAGCATCTCCCGCTCGATGGA 39172
||| ||||||| |||||||||||||||||||||||||| |||||||| ||||||| |
Sbjct 207 CTCGAGCCCGGACAGCGGGTGGTCGGAGACGTACAGGCCGAGCATCTCGCGCTCGAACGC 148
Query 39173 GAGACGCGGACCCTTCGCCCAGTCC 39197
||| ||| | ||| ||||||||
Sbjct 147 GAGGCGCTGCTTCTTGTCCCAGTCC 123
>seq1079
Length=254
Score = 84.2 bits (92), Expect = 7e-12
Identities = 147/211 (70%), Gaps = 5/211 (2%)
Strand=Plus/Minus
Query 41706 AGGTTGTGCAGGCCGGTCTTGTTCGTGGAGAGGATCGTGAGGTGCGTGTACGCACCCCGA 41765
||||||||||| || |||| | | | ||| | ||| | ||||||||||||||| ||
Sbjct 214 AGGTTGTGCAGACCCTCGTTGTCCTTCGCGAGCAGCGTCATGTGCGTGTACGCACCGCGC 155
Query 41766 CCGCTCACGTCGTACCGCTTCTGGTCTTCCGTGCCCCA-CTGGACTCGCTCCTGGTCGAA 41824
| ||||||| || ||| | | | ||||| | | | || || |||||||||
Sbjct 154 GCCGAGACGTCGTCGGACTCCTGCCCCTGC-TGCCCGAACCGCACGCGGGTCTGGTCGAA 96
Query 41825 GCGG---GAGTCCGGGGCCATGTACGCCTCGATGCCGATGATCGGCTTGACCCCAGCGGC 41881
||| | | |||| | | ||||||||||| ||||||||||||||||| || ||
Sbjct 95 CCGGCTCGTGCCCGGCGTGACGTACGCCTCGACGCCGATGATCGGCTTGATGCCCTTCGC 36
Query 41882 CTGCGCCGAGGTGAAGAAGTCGTACGCACCG 41912
||||||| | |||| ||| |||| |||
Sbjct 35 CTGCGCCCGCGACCAGAACTCGAACGCCCCG 5
>seq4528
Length=228
Score = 80.6 bits (88), Expect = 9e-11
Identities = 123/173 (71%), Gaps = 2/173 (1%)
Strand=Plus/Plus
Query 40714 TCGCGATCTGCGCGACCTTGTCGGCCCCGTACTTCCGGGTGACGTACTGGATCACCTCGC 40773
|||||| ||||||| | | | |||| || || | ||||| |||||| |||||
Sbjct 57 TCGCGACCTGCGCGGCGTGCGTGCGCCCGAACGTCTCGTAGACGTGCTGGATGACCTCCT 116
Query 40774 CACGACGC-CGGTCATCGAAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTC 40832
| || ||| | | | |||| ||||||||||| || ||| | |||||||||||
Sbjct 117 CGCGCCGCGCCGAC-TCGATGTCGATGTCGATGTCCGGCGGGCCGTCGCGCTCGGGGGCG 175
Query 40833 AGGAACCGCTCGAAGATGAGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCC 40885
||||| |||||||| | || ||||||| || || ||||| | | ||||| ||
Sbjct 176 AGGAAGCGCTCGAACAGCAGGCCGTGCTTCACCGCGTCGACGGCCGTGATGCC 228
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 164835583939344
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |