Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177915.1_202017-04- 25] 4,708 sequences; 12,504,838 total letters Query= NC_021304.1 Length=51552 Score E Sequences producing significant alignments: (Bits) Value seq2584 466 6e-127 seq752 197 5e-46 seq710 141 3e-29 seq362 86.0 2e-12 seq1079 84.2 7e-12 seq4528 80.6 9e-11 >seq2584 Length=593 Score = 466 bits (516), Expect = 6e-127 Identities = 458/591 (77%), Gaps = 0/591 (0%) Strand=Plus/Minus Query 39820 CGAACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATCGCCCGGCGAAGCAGGTCGG 39879 ||||||||||| | || | ||| |||||||||||||||||| || || |||||||||| Sbjct 593 CGAACTCCTTGTCGAGGATCTCCTTCTTCTTCTTGCCCATCGCGCGCCGCAGCAGGTCGG 534 Query 39880 CCTGACCGAGGGTGTACCCGGCCATGACCTGTGCAACCTTCTGCACTTGCTCCTGGTAGA 39939 |||| ||||| | ||||||||| | || ||| || || |||| || ||||||||||||| Sbjct 533 CCTGTCCGAGCGAGTACCCGGCGAGGATCTGCGCGGCCCTCTGGACCTGCTCCTGGTAGA 474 Query 39940 TGATGAGCTGGAAGGTCGGGTCCAGGATCTCCGACAGGGACTCGGCCACCTCGGGGTGGA 39999 |||||| | ||||| ||| |||||||||| |||| || | | ||| ||||||| Sbjct 473 CGATGAGGCCGTAGGTCTCGTCGAGGATCTCCGCGAGGGGCTGCTCGAGCTCCGGGTGGA 414 Query 40000 TCGGCGTGATCGCCTGCTGCCCGTTCTTCCGGAGGGCGTAGTTCGTGTGAGACCCCACGC 40059 | ||| |||| |||| |||||||||| || || |||||||||||||| || || || Sbjct 413 TGGGCTCGATCTTCTGCAGCCCGTTCTTGCGCAGCGCGTAGTTCGTGTGCGAGTTCATGC 354 Query 40060 CCATCGGACCAGGACGGTACAGCGCGACGACGGCCGAGATGTCCTCGAAGTTGTCCGGCT 40119 ||||||| || || ||||||||||||| ||||||||||| ||| ||||| |||||||||| Sbjct 353 CCATCGGGCCCGGGCGGTACAGCGCGATGACGGCCGAGAGGTCGTCGAACTTGTCCGGCT 294 Query 40120 TCAGCAGACGGAGCAGTGAGCGCATCGCGCCGCCGTCGAGCTGGAAGACCGAGAGCGTGT 40179 ||| | | || || || | |||||| | |||||||||||||||||| || |||||||| Sbjct 293 TCATCTGGCGCAGGAGCGCGCGCATGGGGCCGCCGTCGAGCTGGAACACGCCGAGCGTGT 234 Query 40180 CGCCCCTGGCCAGCAGCTCGTACGTCGCGGGGTCGTCCAGGGGGATGTTCTCCAGGTCGA 40239 | || | || ||||||||||||| ||| |||||| || | || ||| | |||| Sbjct 233 CACCGCGCGCGAGCAGCTCGTACGACGCCTTGTCGTCGAGCGTGAGCGACTCGATCTCGA 174 Query 40240 CGTGCTCCCCACGGTTGAGGCGGATGTTCTCGACCGCGTCGCCCATGATCGTGAGGTTCC 40299 ||||| | ||| | ||||||||||| ||||||| | | |||||||||||||| Sbjct 173 TCGGCTCCTTGCCGTTCATCTCGATGTTCTCGAGCGCGTCGTCGAGGATCGTGAGGTTCC 114 Query 40300 GGAGCCCGAGGAAGTCCATCTTCAGCAGGCCCAGAGCCTCGCAGCTCGGGTAGTCGAACT 40359 | |||||||||||||||||||| | ||||| || ||||| | ||||||||||||||| Sbjct 113 GCAGCCCGAGGAAGTCCATCTTGATGAGGCCGAGGCCCTCGGACGTCGGGTAGTCGAACT 54 Query 40360 GCGTGATCGTCGCGCCGTCCTGCGGCCGAACCCACACCGGGATGTGGTCGA 40410 | ||||| |||||||||||| || || | | ||||||| ||||| Sbjct 53 GGGTGATGACCGCGCCGTCCTGAGGACGGCGCATGATCGGGATGATGTCGA 3 >seq752 Length=287 Score = 197 bits (218), Expect = 5e-46 Identities = 199/256 (78%), Gaps = 2/256 (1%) Strand=Plus/Minus Query 39545 CACGTCGGGCGGCAGGACCCGCAGGCCCATGCGCCGAGACTCGCCGAGGTACGTGGCCAT 39604 |||||| ||||| || || | | ||||||||| ||||| |||||| ||||| Sbjct 260 CACGTCCGGCGGGAGCACGGTGATGTGCATGCGCCGGCACTCGTTGAGGTAGAGGGCCAG 201 Query 39605 CTTGTTCTTGTCGTCGCCCACCGAGGTG-AGCGCAGCCGCCATGTACTCGGCTGGGTAGT 39663 ||||| ||||||||||| ||| | || || |||||||||||||| | ||||||| Sbjct 200 CTTGTCCTTGTCGTCGCGCAC-GCTCTGCAGGAGCGCCGCCATGTACTCCGTCGGGTAGT 142 Query 39664 GCGTCTTCAGCCACGCCGTGCGGTACGCGATGAGTCCGTACGCCGCCGAGTGCGCCTTGT 39723 || ||| || ||||||| | |||||| | ||| |||||| | || ||||||||||||| Sbjct 141 TCGCCTTGAGGAACGCCGTCCAGTACGCCACGAGGCCGTACCCGGCGGAGTGCGCCTTGT 82 Query 39724 TGAAGGCGTAGCCAGCGAACGGGACCAGCACGTCCCACACTGCCTGGATGGCACCGTCCG 39783 ||||||||||||| ||||||||||||||| |||||| || |||||||| || |||| | Sbjct 81 TGAAGGCGTAGCCCGCGAACGGGACCAGCGTGTCCCAGACCGCCTGGATCGCGGCGTCGG 22 Query 39784 AGTAGCCTCGCTCGCG 39799 |||| || ||||| || Sbjct 21 AGTACCCGCGCTCCCG 6 >seq710 Length=223 Score = 141 bits (156), Expect = 3e-29 Identities = 163/218 (75%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 40905 GAACCGGCCGCAGAGCCTCGCCCAGGGCCGACCCAGACGCCGTTCTCCTTCGCCCAGCGG 40964 || || || || ||||| || || |||||||| | || ||| | ||||| |||||| | Sbjct 8 GAGCCCGCGGCCGAGCCACGGCCCGGGCCGACGCGGATGCCCTGGTCCTTGGCCCAGTTG 67 Query 40965 ATGAAGTCCGCGACGACGAGGAAGTACGACGGGAAGCCCATCTGGATGATCATGTCGATC 41024 |||||||| ||||| |||||||||||| ||||||||||||||||||||| | ||| || Sbjct 68 ATGAAGTCGGCGACCACGAGGAAGTACCCCGGGAAGCCCATCTGGATGATGACCTCGGTC 127 Query 41025 TCGTACTGGAGCTGCTTGCCGTGCTCGTAGTCCG---TGCCGTTCGGGTACCGACGACGC 41081 |||||||| |||||||| || | ||||| ||||||| |||||||| || || Sbjct 128 TCGTACTGCGCCTGCTTGC---GCGCCGCGTCCGGGATGCCGTTGGGGTACCGGCGGTGC 184 Query 41082 GCGCCTCGGGCGACCTCGTCCTCGAACCAGGTGATCTC 41119 || || | ||||| | |||||||| | |||| Sbjct 185 AGCCCGCGCTCCACCTCCTTGACGAACCAGCTCGTCTC 222 >seq362 Length=717 Score = 86.0 bits (94), Expect = 2e-12 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 39113 CTCCAGCCCGGCGAGCGGGTGGTCGGAGACGTACAGGCCCAGCATCTCCCGCTCGATGGA 39172 ||| ||||||| |||||||||||||||||||||||||| |||||||| ||||||| | Sbjct 207 CTCGAGCCCGGACAGCGGGTGGTCGGAGACGTACAGGCCGAGCATCTCGCGCTCGAACGC 148 Query 39173 GAGACGCGGACCCTTCGCCCAGTCC 39197 ||| ||| | ||| |||||||| Sbjct 147 GAGGCGCTGCTTCTTGTCCCAGTCC 123 >seq1079 Length=254 Score = 84.2 bits (92), Expect = 7e-12 Identities = 147/211 (70%), Gaps = 5/211 (2%) Strand=Plus/Minus Query 41706 AGGTTGTGCAGGCCGGTCTTGTTCGTGGAGAGGATCGTGAGGTGCGTGTACGCACCCCGA 41765 ||||||||||| || |||| | | | ||| | ||| | ||||||||||||||| || Sbjct 214 AGGTTGTGCAGACCCTCGTTGTCCTTCGCGAGCAGCGTCATGTGCGTGTACGCACCGCGC 155 Query 41766 CCGCTCACGTCGTACCGCTTCTGGTCTTCCGTGCCCCA-CTGGACTCGCTCCTGGTCGAA 41824 | ||||||| || ||| | | | ||||| | | | || || ||||||||| Sbjct 154 GCCGAGACGTCGTCGGACTCCTGCCCCTGC-TGCCCGAACCGCACGCGGGTCTGGTCGAA 96 Query 41825 GCGG---GAGTCCGGGGCCATGTACGCCTCGATGCCGATGATCGGCTTGACCCCAGCGGC 41881 ||| | | |||| | | ||||||||||| ||||||||||||||||| || || Sbjct 95 CCGGCTCGTGCCCGGCGTGACGTACGCCTCGACGCCGATGATCGGCTTGATGCCCTTCGC 36 Query 41882 CTGCGCCGAGGTGAAGAAGTCGTACGCACCG 41912 ||||||| | |||| ||| |||| ||| Sbjct 35 CTGCGCCCGCGACCAGAACTCGAACGCCCCG 5 >seq4528 Length=228 Score = 80.6 bits (88), Expect = 9e-11 Identities = 123/173 (71%), Gaps = 2/173 (1%) Strand=Plus/Plus Query 40714 TCGCGATCTGCGCGACCTTGTCGGCCCCGTACTTCCGGGTGACGTACTGGATCACCTCGC 40773 |||||| ||||||| | | | |||| || || | ||||| |||||| ||||| Sbjct 57 TCGCGACCTGCGCGGCGTGCGTGCGCCCGAACGTCTCGTAGACGTGCTGGATGACCTCCT 116 Query 40774 CACGACGC-CGGTCATCGAAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTC 40832 | || ||| | | | |||| ||||||||||| || ||| | ||||||||||| Sbjct 117 CGCGCCGCGCCGAC-TCGATGTCGATGTCGATGTCCGGCGGGCCGTCGCGCTCGGGGGCG 175 Query 40833 AGGAACCGCTCGAAGATGAGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCC 40885 ||||| |||||||| | || ||||||| || || ||||| | | ||||| || Sbjct 176 AGGAAGCGCTCGAACAGCAGGCCGTGCTTCACCGCGTCGACGGCCGTGATGCC 228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164835583939344