Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177915.1_202017-04- 25] 4,708 sequences; 12,504,838 total letters Query= NC_021305.1 Length=76179 Score E Sequences producing significant alignments: (Bits) Value seq1228 246 1e-60 seq2953 84.2 1e-11 >seq1228 Length=733 Score = 246 bits (272), Expect = 1e-60 Identities = 404/593 (68%), Gaps = 38/593 (6%) Strand=Plus/Minus Query 65970 CAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAG 66029 ||||||||||| || |||||||| || |||||| ||| | || || || |||| | Sbjct 731 CAGCCGGACACGGGGGAGCAGGCGCTCGAGATCACGGACATGCTGATCCGCTCGGGCGCG 672 Query 66030 CTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGC 66089 || |||| ||||| | ||||| || |||||||| ||||| || ||| |||| ||| Sbjct 671 CTCGACATCATCGTCATCGACTCCGTCGCGGCCCTCGTGCCCAAGGCGGAGATCGAGGGC 612 Query 66090 GACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAG 66149 || || || ||||| |||||||| || || || ||||||||||||||||| |||||||| Sbjct 611 GAGATGGGCGACAGCCACGTCGGTCTCCAGGCCCGCCTCATGTCGCAGGCGCTGCGCAAG 552 Query 66150 CTCACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAG 66209 |||| || | || | || |||| | ||| |||||||| | |||||| Sbjct 551 ATCACCGGTGCGCTCAGCGCGTCCGGCACGACCGCCATCTTCATCAACCAGCTCCGCGAG 492 Query 66210 AAGATCGGCAACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGG 66269 |||||||| |||| || |||| | |||||| || || || |||||||| ||| | Sbjct 491 AAGATCGG---CGTGTTCTTCGGCTCTCCCGAGACGACGACCGGTGGCAAGGCGCTGAAG 435 Query 66270 TTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGC------ 66323 ||||||||||| ||||| | || |||| ||||||| ||| ||||| ||| Sbjct 434 TTCTACGCCTCGGTCCGTCTCGACATCCGCCGCATCGAGACCCTCAAGGAGGGCANNNNN 375 Query 66324 -----------------------------GATGAGGCTGTCGGCAACCGCACCCGGGTGA 66354 | || ||||||||||| ||||| |||| Sbjct 374 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGCGGTCGGCAACCGGACCCGCGTGA 315 Query 66355 AGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACG 66414 ||||||||||||||||| |||| |||||| | | ||||||||| | || | |||| Sbjct 314 AGGTCGTCAAGAACAAGATGGCGCCGCCGTTCAAGCAGGCCGAGTTCGACATCCTCTACG 255 Query 66415 GGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGTGTCGCAGGGCCTGGTGA 66474 ||| |||||||| || |||| | ||| ||||| ||| |||| ||| || | ||| Sbjct 254 GGGTCGGCATCTCCCGCGAGGGTGGCCTCATCGACATGGGCGTGGAGCACGGGTTCGTGC 195 Query 66475 AGAAGTCGGGCGCCTGGTTCAAGTACGGGGACAAGAACGTCGCTCAGGGCAAG 66527 ||||| || | ||||||| ||||| | | | | ||| ||||||||| Sbjct 194 GCAAGTCCGGGTCGTGGTTCACCTACGGCGGCGACCAGCTCGGGCAGGGCAAG 142 >seq2953 Length=185 Score = 84.2 bits (92), Expect = 1e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 60297 GACGGCGACGCCACATTCCTCCGCTGCACCATCTGGCGCGACGCCGCCGAGAACGTAGCG 60356 ||||| ||| || ||| | |||||| | ||||||||||| ||||| |||||||| ||| Sbjct 120 GACGGGGACACCCTGTTCATGCGCTGCTCGATCTGGCGCGAGGCCGCGGAGAACGTCGCG 61 Query 60357 GAAAGCCTCCAGAAAGGCCAGCGCGTCATCGTGCATGGCTACCTCAAGCAGCGCTC 60412 || || ||| ||| ||||||||||||||| ||| |||| |||||||| Sbjct 60 GAGTCGCTGACGAAGGGCATGCGCGTCATCGTGCAGGGCCGCCTCGTCCAGCGCTC 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 243634019782320