Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177915.1_202017-04-
25] 4,708 sequences; 12,504,838 total letters
Query= NC_021339.1
Length=51077
Score E
Sequences producing significant alignments: (Bits) Value
seq2584 448 2e-121
seq752 188 2e-43
seq710 131 5e-26
seq362 100 9e-17
seq4528 89.7 2e-13
>seq2584
Length=593
Score = 448 bits (496), Expect = 2e-121
Identities = 454/591 (77%), Gaps = 0/591 (0%)
Strand=Plus/Minus
Query 39280 CGAACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATCGCCCGGCGAAGCAGGTCGG 39339
||||||||||| | || | ||| |||||||||||||||||| || || ||||||||||
Sbjct 593 CGAACTCCTTGTCGAGGATCTCCTTCTTCTTCTTGCCCATCGCGCGCCGCAGCAGGTCGG 534
Query 39340 CCTGACCCAGGGTGTACCCGGCCATGACCTGTGCAACCTTCTGCACCTGCTCCTGGTAGA 39399
|||| || || | ||||||||| | || ||| || || |||| ||||||||||||||||
Sbjct 533 CCTGTCCGAGCGAGTACCCGGCGAGGATCTGCGCGGCCCTCTGGACCTGCTCCTGGTAGA 474
Query 39400 TGATCAACTGGAATGTCGGGTCCAGGATCTCCGACAGGGACTCGGCCACCTCGGGGTGGA 39459
||| | | | ||| ||| |||||||||| |||| || | | ||| |||||||
Sbjct 473 CGATGAGGCCGTAGGTCTCGTCGAGGATCTCCGCGAGGGGCTGCTCGAGCTCCGGGTGGA 414
Query 39460 TCGGCGTGATCGCCTGCTGCCCGTTCTTCCGGAGGGCGTAGTTCGTGTGAGACCCCACGC 39519
| ||| |||| |||| |||||||||| || || |||||||||||||| || || ||
Sbjct 413 TGGGCTCGATCTTCTGCAGCCCGTTCTTGCGCAGCGCGTAGTTCGTGTGCGAGTTCATGC 354
Query 39520 CCATCGGACCCGGACGGTACAGCGCGACGACGGCTGAGATGTCCTCGAAGTTGTCCGGCT 39579
||||||| ||||| ||||||||||||| |||||| |||| ||| ||||| ||||||||||
Sbjct 353 CCATCGGGCCCGGGCGGTACAGCGCGATGACGGCCGAGAGGTCGTCGAACTTGTCCGGCT 294
Query 39580 TCAGCAGGCGGAGCAGTGAGCGCATCGCGCCGCCGTCGAGCTGGAAGACCGAGAGCGTGT 39639
||| | |||| || || | |||||| | |||||||||||||||||| || ||||||||
Sbjct 293 TCATCTGGCGCAGGAGCGCGCGCATGGGGCCGCCGTCGAGCTGGAACACGCCGAGCGTGT 234
Query 39640 CGCCCCTGGCCAGCAGCTCGTAGGTCGGGGCGTCGTCCAGAGGGATGTTCTCCAGGTCGA 39699
| || | || ||||||||||| | || |||||| || | || ||| | ||||
Sbjct 233 CACCGCGCGCGAGCAGCTCGTACGACGCCTTGTCGTCGAGCGTGAGCGACTCGATCTCGA 174
Query 39700 CGTGCTCCCCACGGTTGAGGCGGATGTTCTCGACCGCGTCGCCCATGATCGTGAGGTTCC 39759
||||| | ||| | ||||||||||| ||||||| | | ||||||||||||||
Sbjct 173 TCGGCTCCTTGCCGTTCATCTCGATGTTCTCGAGCGCGTCGTCGAGGATCGTGAGGTTCC 114
Query 39760 GGAGCCCGAGGAAGTCCATCTTCAGCAGGCCCAGAGCCTCGCAGCTCGGGTAGTCGAACT 39819
| |||||||||||||||||||| | ||||| || ||||| | |||||||||||||||
Sbjct 113 GCAGCCCGAGGAAGTCCATCTTGATGAGGCCGAGGCCCTCGGACGTCGGGTAGTCGAACT 54
Query 39820 GCGTGATCGTCGCGCCGTCCTGCGGCCGAACCCACACCGGGATGTGGTCGA 39870
| ||||| |||||||||||| || || | | ||||||| |||||
Sbjct 53 GGGTGATGACCGCGCCGTCCTGAGGACGGCGCATGATCGGGATGATGTCGA 3
>seq752
Length=287
Score = 188 bits (208), Expect = 2e-43
Identities = 197/256 (77%), Gaps = 2/256 (1%)
Strand=Plus/Minus
Query 39005 CACGTCGGGCGGCAGGACCCGAAGGCCCATGCGCCGTGCCTCGCCGAGGTACGTGGCCAT 39064
|||||| ||||| || || | | ||||||||| |||| |||||| |||||
Sbjct 260 CACGTCCGGCGGGAGCACGGTGATGTGCATGCGCCGGCACTCGTTGAGGTAGAGGGCCAG 201
Query 39065 CTTGTTCTTGTCGTCGCCCACCGAGGTG-AGCGCAGCCGCCATGTACTCGGCCGGGTAGT 39123
||||| ||||||||||| ||| | || || |||||||||||||| | ||||||||
Sbjct 200 CTTGTCCTTGTCGTCGCGCAC-GCTCTGCAGGAGCGCCGCCATGTACTCCGTCGGGTAGT 142
Query 39124 GCGTCTTCAACCACGCCGTGCGGTACGCGATGAGTCCGTACGCCGCCGAGTGCGCCTTGT 39183
|| ||| | ||||||| | |||||| | ||| |||||| | || |||||||||||||
Sbjct 141 TCGCCTTGAGGAACGCCGTCCAGTACGCCACGAGGCCGTACCCGGCGGAGTGCGCCTTGT 82
Query 39184 TGAAGGCGTAGCCAGCGAAGGGGACCAGCACGTCCCACACTGCCTGGATGGCACCGTCCG 39243
||||||||||||| ||||| ||||||||| |||||| || |||||||| || |||| |
Sbjct 81 TGAAGGCGTAGCCCGCGAACGGGACCAGCGTGTCCCAGACCGCCTGGATCGCGGCGTCGG 22
Query 39244 AGTAGCCTCGCTCGCG 39259
|||| || ||||| ||
Sbjct 21 AGTACCCGCGCTCCCG 6
>seq710
Length=223
Score = 131 bits (144), Expect = 5e-26
Identities = 163/220 (74%), Gaps = 10/220 (5%)
Strand=Plus/Plus
Query 40365 GAACCGGCCGCAGAGCCCCGCCCAGGGCCGACCCAGACCCCGTTCTCCTTCGCCCAGCGG 40424
|| || || || ||||| || || |||||||| | || || | ||||| |||||| |
Sbjct 8 GAGCCCGCGGCCGAGCCACGGCCCGGGCCGACGCGGATGCCCTGGTCCTTGGCCCAGTTG 67
Query 40425 ATGAAGTCCGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGATGATCATGTCGATC 40484
|||||||| ||||| |||||||||||| |||||| |||||||||||||| | ||| ||
Sbjct 68 ATGAAGTCGGCGACCACGAGGAAGTACCCCGGGAAGCCCATCTGGATGATGACCTCGGTC 127
Query 40485 TCGTACTGGAGCTGCTTGCCGTGCTCGTAGTCCG---TGCCGTTCGGGTACCGACGACGG 40541
|||||||| |||||||| || | ||||| ||||||| |||||||| || |
Sbjct 128 TCGTACTGCGCCTGCTTGC---GCGCCGCGTCCGGGATGCCGTTGGGGTACCGGCG--GT 182
Query 40542 GCA--CCTCGATGGACCTCGTCCTCGAACCAGGTGATCTC 40579
||| || || | ||||| | |||||||| | ||||
Sbjct 183 GCAGCCCGCGCTCCACCTCCTTGACGAACCAGCTCGTCTC 222
>seq362
Length=717
Score = 100 bits (110), Expect = 9e-17
Identities = 73/85 (86%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 38573 CTCCAGCCCGGCGAGCGGGTGGTCGGAGACGTACAGGCCCAGCATCTCGCGCTCGATGGC 38632
||| ||||||| |||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct 207 CTCGAGCCCGGACAGCGGGTGGTCGGAGACGTACAGGCCGAGCATCTCGCGCTCGAACGC 148
Query 38633 GAGGCGCGGACCCTTGCTCCAGTCC 38657
||||||| | |||| |||||||
Sbjct 147 GAGGCGCTGCTTCTTGTCCCAGTCC 123
>seq4528
Length=228
Score = 89.7 bits (98), Expect = 2e-13
Identities = 125/173 (72%), Gaps = 2/173 (1%)
Strand=Plus/Plus
Query 40174 TCGCGATCTGCGCGACCTTGTCGGCCCCGTACTTCCGGGTGACGTACTGGATGACCTCGC 40233
|||||| ||||||| | | | |||| || || | ||||| ||||||||||||
Sbjct 57 TCGCGACCTGCGCGGCGTGCGTGCGCCCGAACGTCTCGTAGACGTGCTGGATGACCTCCT 116
Query 40234 CACGACGC-CGGTCATCGAAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTC 40292
| || ||| | | | |||| ||||||||||| || ||| | |||||||||||
Sbjct 117 CGCGCCGCGCCGAC-TCGATGTCGATGTCGATGTCCGGCGGGCCGTCGCGCTCGGGGGCG 175
Query 40293 AGGAAGCGCTCGAAGATGAGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCC 40345
|||||||||||||| | || ||||||| || || ||||| | | ||||| ||
Sbjct 176 AGGAAGCGCTCGAACAGCAGGCCGTGCTTCACCGCGTCGACGGCCGTGATGCC 228
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 163315668918744
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |