Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177915.1_202017-04- 25] 4,708 sequences; 12,504,838 total letters Query= NC_021339.1 Length=51077 Score E Sequences producing significant alignments: (Bits) Value seq2584 448 2e-121 seq752 188 2e-43 seq710 131 5e-26 seq362 100 9e-17 seq4528 89.7 2e-13 >seq2584 Length=593 Score = 448 bits (496), Expect = 2e-121 Identities = 454/591 (77%), Gaps = 0/591 (0%) Strand=Plus/Minus Query 39280 CGAACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATCGCCCGGCGAAGCAGGTCGG 39339 ||||||||||| | || | ||| |||||||||||||||||| || || |||||||||| Sbjct 593 CGAACTCCTTGTCGAGGATCTCCTTCTTCTTCTTGCCCATCGCGCGCCGCAGCAGGTCGG 534 Query 39340 CCTGACCCAGGGTGTACCCGGCCATGACCTGTGCAACCTTCTGCACCTGCTCCTGGTAGA 39399 |||| || || | ||||||||| | || ||| || || |||| |||||||||||||||| Sbjct 533 CCTGTCCGAGCGAGTACCCGGCGAGGATCTGCGCGGCCCTCTGGACCTGCTCCTGGTAGA 474 Query 39400 TGATCAACTGGAATGTCGGGTCCAGGATCTCCGACAGGGACTCGGCCACCTCGGGGTGGA 39459 ||| | | | ||| ||| |||||||||| |||| || | | ||| ||||||| Sbjct 473 CGATGAGGCCGTAGGTCTCGTCGAGGATCTCCGCGAGGGGCTGCTCGAGCTCCGGGTGGA 414 Query 39460 TCGGCGTGATCGCCTGCTGCCCGTTCTTCCGGAGGGCGTAGTTCGTGTGAGACCCCACGC 39519 | ||| |||| |||| |||||||||| || || |||||||||||||| || || || Sbjct 413 TGGGCTCGATCTTCTGCAGCCCGTTCTTGCGCAGCGCGTAGTTCGTGTGCGAGTTCATGC 354 Query 39520 CCATCGGACCCGGACGGTACAGCGCGACGACGGCTGAGATGTCCTCGAAGTTGTCCGGCT 39579 ||||||| ||||| ||||||||||||| |||||| |||| ||| ||||| |||||||||| Sbjct 353 CCATCGGGCCCGGGCGGTACAGCGCGATGACGGCCGAGAGGTCGTCGAACTTGTCCGGCT 294 Query 39580 TCAGCAGGCGGAGCAGTGAGCGCATCGCGCCGCCGTCGAGCTGGAAGACCGAGAGCGTGT 39639 ||| | |||| || || | |||||| | |||||||||||||||||| || |||||||| Sbjct 293 TCATCTGGCGCAGGAGCGCGCGCATGGGGCCGCCGTCGAGCTGGAACACGCCGAGCGTGT 234 Query 39640 CGCCCCTGGCCAGCAGCTCGTAGGTCGGGGCGTCGTCCAGAGGGATGTTCTCCAGGTCGA 39699 | || | || ||||||||||| | || |||||| || | || ||| | |||| Sbjct 233 CACCGCGCGCGAGCAGCTCGTACGACGCCTTGTCGTCGAGCGTGAGCGACTCGATCTCGA 174 Query 39700 CGTGCTCCCCACGGTTGAGGCGGATGTTCTCGACCGCGTCGCCCATGATCGTGAGGTTCC 39759 ||||| | ||| | ||||||||||| ||||||| | | |||||||||||||| Sbjct 173 TCGGCTCCTTGCCGTTCATCTCGATGTTCTCGAGCGCGTCGTCGAGGATCGTGAGGTTCC 114 Query 39760 GGAGCCCGAGGAAGTCCATCTTCAGCAGGCCCAGAGCCTCGCAGCTCGGGTAGTCGAACT 39819 | |||||||||||||||||||| | ||||| || ||||| | ||||||||||||||| Sbjct 113 GCAGCCCGAGGAAGTCCATCTTGATGAGGCCGAGGCCCTCGGACGTCGGGTAGTCGAACT 54 Query 39820 GCGTGATCGTCGCGCCGTCCTGCGGCCGAACCCACACCGGGATGTGGTCGA 39870 | ||||| |||||||||||| || || | | ||||||| ||||| Sbjct 53 GGGTGATGACCGCGCCGTCCTGAGGACGGCGCATGATCGGGATGATGTCGA 3 >seq752 Length=287 Score = 188 bits (208), Expect = 2e-43 Identities = 197/256 (77%), Gaps = 2/256 (1%) Strand=Plus/Minus Query 39005 CACGTCGGGCGGCAGGACCCGAAGGCCCATGCGCCGTGCCTCGCCGAGGTACGTGGCCAT 39064 |||||| ||||| || || | | ||||||||| |||| |||||| ||||| Sbjct 260 CACGTCCGGCGGGAGCACGGTGATGTGCATGCGCCGGCACTCGTTGAGGTAGAGGGCCAG 201 Query 39065 CTTGTTCTTGTCGTCGCCCACCGAGGTG-AGCGCAGCCGCCATGTACTCGGCCGGGTAGT 39123 ||||| ||||||||||| ||| | || || |||||||||||||| | |||||||| Sbjct 200 CTTGTCCTTGTCGTCGCGCAC-GCTCTGCAGGAGCGCCGCCATGTACTCCGTCGGGTAGT 142 Query 39124 GCGTCTTCAACCACGCCGTGCGGTACGCGATGAGTCCGTACGCCGCCGAGTGCGCCTTGT 39183 || ||| | ||||||| | |||||| | ||| |||||| | || ||||||||||||| Sbjct 141 TCGCCTTGAGGAACGCCGTCCAGTACGCCACGAGGCCGTACCCGGCGGAGTGCGCCTTGT 82 Query 39184 TGAAGGCGTAGCCAGCGAAGGGGACCAGCACGTCCCACACTGCCTGGATGGCACCGTCCG 39243 ||||||||||||| ||||| ||||||||| |||||| || |||||||| || |||| | Sbjct 81 TGAAGGCGTAGCCCGCGAACGGGACCAGCGTGTCCCAGACCGCCTGGATCGCGGCGTCGG 22 Query 39244 AGTAGCCTCGCTCGCG 39259 |||| || ||||| || Sbjct 21 AGTACCCGCGCTCCCG 6 >seq710 Length=223 Score = 131 bits (144), Expect = 5e-26 Identities = 163/220 (74%), Gaps = 10/220 (5%) Strand=Plus/Plus Query 40365 GAACCGGCCGCAGAGCCCCGCCCAGGGCCGACCCAGACCCCGTTCTCCTTCGCCCAGCGG 40424 || || || || ||||| || || |||||||| | || || | ||||| |||||| | Sbjct 8 GAGCCCGCGGCCGAGCCACGGCCCGGGCCGACGCGGATGCCCTGGTCCTTGGCCCAGTTG 67 Query 40425 ATGAAGTCCGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGATGATCATGTCGATC 40484 |||||||| ||||| |||||||||||| |||||| |||||||||||||| | ||| || Sbjct 68 ATGAAGTCGGCGACCACGAGGAAGTACCCCGGGAAGCCCATCTGGATGATGACCTCGGTC 127 Query 40485 TCGTACTGGAGCTGCTTGCCGTGCTCGTAGTCCG---TGCCGTTCGGGTACCGACGACGG 40541 |||||||| |||||||| || | ||||| ||||||| |||||||| || | Sbjct 128 TCGTACTGCGCCTGCTTGC---GCGCCGCGTCCGGGATGCCGTTGGGGTACCGGCG--GT 182 Query 40542 GCA--CCTCGATGGACCTCGTCCTCGAACCAGGTGATCTC 40579 ||| || || | ||||| | |||||||| | |||| Sbjct 183 GCAGCCCGCGCTCCACCTCCTTGACGAACCAGCTCGTCTC 222 >seq362 Length=717 Score = 100 bits (110), Expect = 9e-17 Identities = 73/85 (86%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 38573 CTCCAGCCCGGCGAGCGGGTGGTCGGAGACGTACAGGCCCAGCATCTCGCGCTCGATGGC 38632 ||| ||||||| |||||||||||||||||||||||||| |||||||||||||||| || Sbjct 207 CTCGAGCCCGGACAGCGGGTGGTCGGAGACGTACAGGCCGAGCATCTCGCGCTCGAACGC 148 Query 38633 GAGGCGCGGACCCTTGCTCCAGTCC 38657 ||||||| | |||| ||||||| Sbjct 147 GAGGCGCTGCTTCTTGTCCCAGTCC 123 >seq4528 Length=228 Score = 89.7 bits (98), Expect = 2e-13 Identities = 125/173 (72%), Gaps = 2/173 (1%) Strand=Plus/Plus Query 40174 TCGCGATCTGCGCGACCTTGTCGGCCCCGTACTTCCGGGTGACGTACTGGATGACCTCGC 40233 |||||| ||||||| | | | |||| || || | ||||| |||||||||||| Sbjct 57 TCGCGACCTGCGCGGCGTGCGTGCGCCCGAACGTCTCGTAGACGTGCTGGATGACCTCCT 116 Query 40234 CACGACGC-CGGTCATCGAAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTC 40292 | || ||| | | | |||| ||||||||||| || ||| | ||||||||||| Sbjct 117 CGCGCCGCGCCGAC-TCGATGTCGATGTCGATGTCCGGCGGGCCGTCGCGCTCGGGGGCG 175 Query 40293 AGGAAGCGCTCGAAGATGAGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCC 40345 |||||||||||||| | || ||||||| || || ||||| | | ||||| || Sbjct 176 AGGAAGCGCTCGAACAGCAGGCCGTGCTTCACCGCGTCGACGGCCGTGATGCC 228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163315668918744