Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177915.1_202017-04- 25] 4,708 sequences; 12,504,838 total letters Query= NC_022059.1 Length=77367 Score E Sequences producing significant alignments: (Bits) Value seq1228 230 1e-55 seq2953 87.8 9e-13 >seq1228 Length=733 Score = 230 bits (254), Expect = 1e-55 Identities = 403/596 (68%), Gaps = 44/596 (7%) Strand=Plus/Minus Query 67802 CAGCCAGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAG 67861 ||||| ||||| || |||||||| || |||||| ||| | || || || |||| | Sbjct 731 CAGCCGGACACGGGGGAGCAGGCGCTCGAGATCACGGACATGCTGATCCGCTCGGGCGCG 672 Query 67862 GTTTCCATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGG 67921 | ||||||||| | ||||| || |||||||| ||||| ||||||| |||| || Sbjct 671 CTCGACATCATCGTCATCGACTCCGTCGCGGCCCTCGTGCCCAAGGCGGAGATCGAGGGC 612 Query 67922 GACATCGGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAG 67981 || || || ||| |||||||| || || |||||||| ||||| ||||| |||||||| Sbjct 611 GAGATGGGCGACAGCCACGTCGGTCTCCAGGCCCGCCTCATGTCGCAGGCGCTGCGCAAG 552 Query 67982 CTGACCGGCACGATTGCCAGCAC---CAACACGCTCACCCTGTGGGTGAATCAGCTGCGC 68038 | ||||| || | |||| | | |||| | || | | | || ||||| ||| Sbjct 551 ATCACCGGTGCGCT---CAGCGCGTCCGGCACGACCGCCATCTTCATCAACCAGCTCCGC 495 Query 68039 GAGAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACCGGTGGTAAGGCTCTG 68098 |||||||||||| ||| || |||| | ||||| || |||||||| ||||| ||| Sbjct 494 GAGAAGATCGGC---GTGTTCTTCGGCTCTCCCGAGACGACGACCGGTGGCAAGGCGCTG 438 Query 68099 CGCTTCTACGCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAAGGAAGGC--- 68155 |||||||||||||| ||| | || ||||| | |||| ||| ||||| ||| Sbjct 437 AAGTTCTACGCCTCGGTCCGTCTCGACATCCGCCGCATCGAGACCCTCAAGGAGGGCANN 378 Query 68156 --------------------------------GATGAGGCTGTCGGCAACCGCACGCGCG 68183 | || ||||||||||| || |||| Sbjct 377 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGCGGTCGGCAACCGGACCCGCG 318 Query 68184 TGAAGGTTGTCAAGAACAAGCTGGCGCCTCCGCACCGCCAGGCTGAGTTTTCCATCGTCT 68243 ||||||| |||||||||||| ||||||| ||| | ||||| ||||| |||| ||| Sbjct 317 TGAAGGTCGTCAAGAACAAGATGGCGCCGCCGTTCAAGCAGGCCGAGTTCGACATCCTCT 258 Query 68244 ACGGCGAGGGCATTTCCCGCGAGGCCGAACTCCTCGACATGGCCGTTTCCCGAGGGCTCA 68303 |||| | ||||| |||||||||| | ||| ||||||||| ||| | ||| || Sbjct 257 ACGGGGTCGGCATCTCCCGCGAGGGTGGCCTCATCGACATGGGCGTGGAGCACGGGTTCG 198 Query 68304 TCAAGAAGTCTGGGGCCTGGTTCAAGTACGGGGACAAGAACATCGGCCAGGGCAAG 68359 | ||||| ||| | ||||||| ||||| | | | | |||| ||||||||| Sbjct 197 TGCGCAAGTCCGGGTCGTGGTTCACCTACGGCGGCGACCAGCTCGGGCAGGGCAAG 142 >seq2953 Length=185 Score = 87.8 bits (96), Expect = 9e-13 Identities = 130/184 (71%), Gaps = 13/184 (7%) Strand=Plus/Minus Query 61012 GTCGCCAACTTCACCGTCGTGTCCAACGAACGCCGCCG-----CGACGCCCAGGGCAAC- 61065 || ||||||||||| || | ||||| |||||| | |||| |||| ||| Sbjct 183 GTGGCCAACTTCACGGTGGCGTCCA-----CGCCGCGGACCTTCGACCGCCAGTCGAACG 129 Query 61066 --TGGGTCGACGGCGACGCCACATTCCTCCGCTGCACCATCTGGCGCGACGCCGCCGAGA 61123 ||| ||||| ||| || ||| | |||||| | ||||||||||| ||||| |||| Sbjct 128 AGTGGAAGGACGGGGACACCCTGTTCATGCGCTGCTCGATCTGGCGCGAGGCCGCGGAGA 69 Query 61124 ACGTAGCGGAAAGCCTCCAGAAAGGCCAGCGCGTCATCGTGCATGGCTACCTCAAGCAGC 61183 |||| ||||| || ||| ||| ||||||||||||||| ||| |||| |||| Sbjct 68 ACGTCGCGGAGTCGCTGACGAAGGGCATGCGCGTCATCGTGCAGGGCCGCCTCGTCCAGC 9 Query 61184 GCTC 61187 |||| Sbjct 8 GCTC 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 247435401651264