Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177915.1_202017-04- 25] 4,708 sequences; 12,504,838 total letters Query= NC_022085.1 Length=76483 Score E Sequences producing significant alignments: (Bits) Value seq1228 251 3e-62 seq2953 84.2 1e-11 >seq1228 Length=733 Score = 251 bits (278), Expect = 3e-62 Identities = 405/593 (68%), Gaps = 38/593 (6%) Strand=Plus/Minus Query 66385 CAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAG 66444 ||||||||||| || |||||||| || |||||| ||| | || || || |||| | Sbjct 731 CAGCCGGACACGGGGGAGCAGGCGCTCGAGATCACGGACATGCTGATCCGCTCGGGCGCG 672 Query 66445 CTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGC 66504 || |||| ||||| | ||||| || |||||||| ||||| || ||| |||| ||| Sbjct 671 CTCGACATCATCGTCATCGACTCCGTCGCGGCCCTCGTGCCCAAGGCGGAGATCGAGGGC 612 Query 66505 GACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAG 66564 || || || ||||| |||||||| || || || ||||||||||||||||| |||||||| Sbjct 611 GAGATGGGCGACAGCCACGTCGGTCTCCAGGCCCGCCTCATGTCGCAGGCGCTGCGCAAG 552 Query 66565 CTCACCGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAG 66624 ||||||| | || | || |||| | ||| |||||||| | |||||| Sbjct 551 ATCACCGGTGCGCTCAGCGCGTCCGGCACGACCGCCATCTTCATCAACCAGCTCCGCGAG 492 Query 66625 AAGATCGGCAACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGG 66684 |||||||| |||| || |||| | |||||| || || || |||||||| ||| | Sbjct 491 AAGATCGG---CGTGTTCTTCGGCTCTCCCGAGACGACGACCGGTGGCAAGGCGCTGAAG 435 Query 66685 TTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGC------ 66738 ||||||||||| ||||| | || |||| ||||||| ||| ||||| ||| Sbjct 434 TTCTACGCCTCGGTCCGTCTCGACATCCGCCGCATCGAGACCCTCAAGGAGGGCANNNNN 375 Query 66739 -----------------------------GATGAGGCTGTCGGCAACCGCACCCGGGTGA 66769 | || ||||||||||| ||||| |||| Sbjct 374 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGCGGTCGGCAACCGGACCCGCGTGA 315 Query 66770 AGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACG 66829 ||||||||||||||||| |||| |||||| | | ||||||||| | || | |||| Sbjct 314 AGGTCGTCAAGAACAAGATGGCGCCGCCGTTCAAGCAGGCCGAGTTCGACATCCTCTACG 255 Query 66830 GGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGTGTCGCAGGGCCTGGTGA 66889 ||| |||||||| || |||| | ||| ||||| ||| |||| ||| || | ||| Sbjct 254 GGGTCGGCATCTCCCGCGAGGGTGGCCTCATCGACATGGGCGTGGAGCACGGGTTCGTGC 195 Query 66890 AGAAGTCGGGCGCCTGGTTCAAGTACGGGGACAAGAACGTCGCCCAGGGCAAG 66942 ||||| || | ||||||| ||||| | | | | ||| ||||||||| Sbjct 194 GCAAGTCCGGGTCGTGGTTCACCTACGGCGGCGACCAGCTCGGGCAGGGCAAG 142 >seq2953 Length=185 Score = 84.2 bits (92), Expect = 1e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 59934 GACGGCGACGCCACATTCCTCCGCTGCACCATCTGGCGCGACGCCGCCGAGAACGTGGCG 59993 ||||| ||| || ||| | |||||| | ||||||||||| ||||| |||||||| ||| Sbjct 120 GACGGGGACACCCTGTTCATGCGCTGCTCGATCTGGCGCGAGGCCGCGGAGAACGTCGCG 61 Query 59994 GAAAGCCTCCAGAAAGGCCAGCGCGTCATCGTGCATGGCTACCTCAAGCAGCGCTC 60049 || || ||| ||| ||||||||||||||| ||| |||| |||||||| Sbjct 60 GAGTCGCTGACGAAGGGCATGCGCGTCATCGTGCAGGGCCGCCTCGTCCAGCGCTC 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 244606763964272