Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177915.1_202017-04- 25] 4,708 sequences; 12,504,838 total letters Query= NC_028892.1 Length=49949 Score E Sequences producing significant alignments: (Bits) Value seq2584 520 3e-143 seq752 192 2e-44 seq710 125 2e-24 seq1079 98.7 3e-16 >seq2584 Length=593 Score = 520 bits (576), Expect = 3e-143 Identities = 456/568 (80%), Gaps = 0/568 (0%) Strand=Plus/Minus Query 38111 CGAACTCCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGGAGGTCGG 38170 ||||||||||| | || | ||| ||||||||||||||| ||||| || || ||||||| Sbjct 593 CGAACTCCTTGTCGAGGATCTCCTTCTTCTTCTTGCCCATCGCGCGCCGCAGCAGGTCGG 534 Query 38171 CCTGACCGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGA 38230 |||| ||||| | ||||||||| ||||||||||| ||| |||| |||||||||||||||| Sbjct 533 CCTGTCCGAGCGAGTACCCGGCGAGGATCTGCGCGGCCCTCTGGACCTGCTCCTGGTAGA 474 Query 38231 TGATGAGCCCGAAGGTCGGGTCCAGGATCTCGGCCAGCGGCTCCTCCACCTCGGGGTGGA 38290 |||||| ||| ||||| ||| |||||||| || || |||| ||| | ||| ||||||| Sbjct 473 CGATGAGGCCGTAGGTCTCGTCGAGGATCTCCGCGAGGGGCTGCTCGAGCTCCGGGTGGA 414 Query 38291 TCGGCGTGATCTCCTGCTGACCGTTCTTGCGGAGGGCGTAGTTCGTGTGCGAGCCCATGC 38350 | ||| ||||| |||| | ||||||||||| || |||||||||||||||||| ||||| Sbjct 413 TGGGCTCGATCTTCTGCAGCCCGTTCTTGCGCAGCGCGTAGTTCGTGTGCGAGTTCATGC 354 Query 38351 CCATCGGACCCGGACGGTACAGCGCGACGACGGCCGAGATGTCCTCGAACTGGTCCGGCT 38410 ||||||| ||||| ||||||||||||| ||||||||||| ||| ||||||| |||||||| Sbjct 353 CCATCGGGCCCGGGCGGTACAGCGCGATGACGGCCGAGAGGTCGTCGAACTTGTCCGGCT 294 Query 38411 TCAGCAGGCGAAGCAGGGAGCGCATCGCGCCGCCGTCGAGCTGGAAGACCGAGAGGGTGT 38470 ||| | |||| || || | |||||| | |||||||||||||||||| || ||| |||| Sbjct 293 TCATCTGGCGCAGGAGCGCGCGCATGGGGCCGCCGTCGAGCTGGAACACGCCGAGCGTGT 234 Query 38471 CGCCCCTGGCCAGCAGCTCGTAGGTTGCCGGGTCGTCCAGCGGGATGTTCTCGATGTCGA 38530 | || | || ||||||||||| | ||| |||||| |||| || |||||| |||| Sbjct 233 CACCGCGCGCGAGCAGCTCGTACGACGCCTTGTCGTCGAGCGTGAGCGACTCGATCTCGA 174 Query 38531 CGTGCTCACCACGGTTGCGGCGGATGTTCTCGACCGCGTCGCCCATGATCGTGAGGTTCC 38590 |||| | ||| ||||||||||| ||||||| | | |||||||||||||| Sbjct 173 TCGGCTCCTTGCCGTTCATCTCGATGTTCTCGAGCGCGTCGTCGAGGATCGTGAGGTTCC 114 Query 38591 GGAGCCCGAGGAAGTCCATCTTCAGCAGGCCCAGGGCCTCGCAGCTCGGGTAGTCGAACT 38650 | |||||||||||||||||||| | ||||| ||| ||||| | ||||||||||||||| Sbjct 113 GCAGCCCGAGGAAGTCCATCTTGATGAGGCCGAGGCCCTCGGACGTCGGGTAGTCGAACT 54 Query 38651 GCGTGATCGTCACGCCGTCCGCAGGCCG 38678 | ||||| | |||||||| ||| || Sbjct 53 GGGTGATGACCGCGCCGTCCTGAGGACG 26 >seq752 Length=287 Score = 192 bits (212), Expect = 2e-44 Identities = 196/253 (77%), Gaps = 2/253 (1%) Strand=Plus/Minus Query 37836 CACGTCGGGCGGCAGGACCCGAAGGCCCATGCGCCTGCACTCGCCGAGGTACGTGGCCAT 37895 |||||| ||||| || || | | |||||||| ||||||| |||||| ||||| Sbjct 260 CACGTCCGGCGGGAGCACGGTGATGTGCATGCGCCGGCACTCGTTGAGGTAGAGGGCCAG 201 Query 37896 CTTGTTCTTGTCGTCGCCCACCGAGGTG-AGCACGGCCGCCATGTACTCGGCCGGGTAGT 37954 ||||| ||||||||||| ||| | || || | |||||||||||||| | |||||||| Sbjct 200 CTTGTCCTTGTCGTCGCGCAC-GCTCTGCAGGAGCGCCGCCATGTACTCCGTCGGGTAGT 142 Query 37955 GCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGTCCGTACGCCGCAGAGTGCGCCTTGT 38014 || ||| ||| ||||||| | ||| || | ||| |||||| | || ||||||||||||| Sbjct 141 TCGCCTTGAGGAACGCCGTCCAGTACGCCACGAGGCCGTACCCGGCGGAGTGCGCCTTGT 82 Query 38015 TGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCCCACACCGCCCGGATGGCAGCCTCCG 38074 |||||||||| || ||||| || || ||| |||||| |||||| |||| || || || | Sbjct 81 TGAAGGCGTAGCCCGCGAACGGGACCAGCGTGTCCCAGACCGCCTGGATCGCGGCGTCGG 22 Query 38075 AGTAGCCTCGCTC 38087 |||| || ||||| Sbjct 21 AGTACCCGCGCTC 9 >seq710 Length=223 Score = 125 bits (138), Expect = 2e-24 Identities = 116/147 (79%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 39189 GGCCAGCGAGCCAGCCGCAGAGCCGCGCCCAGGGCCGACCCACACGCCGTTCTCCTTCGC 39248 ||||| ||||| || || ||||| || || |||||||| | | ||| | ||||| || Sbjct 1 GGCCATGGAGCCCGCGGCCGAGCCACGGCCCGGGCCGACGCGGATGCCCTGGTCCTTGGC 60 Query 39249 CCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGATCAT 39308 |||| ||||||||||||||| |||||||||||| |||||| ||||||||| |||| | Sbjct 61 CCAGTTGATGAAGTCGGCGACCACGAGGAAGTACCCCGGGAAGCCCATCTGGATGATGAC 120 Query 39309 GTCGATCTCGTACTCGACCTGCGTGCG 39335 ||| ||||||||| ||||| |||| Sbjct 121 CTCGGTCTCGTACTGCGCCTGCTTGCG 147 >seq1079 Length=254 Score = 98.7 bits (108), Expect = 3e-16 Identities = 152/214 (71%), Gaps = 5/214 (2%) Strand=Plus/Minus Query 39993 GAACAGGTTGTGCAGGCCGGTCTTGTTCGTGGCGAGCATGGTCATGTGGGTGTAGGCACC 40052 ||||||||||||||| || |||| | | ||||||| |||||||| ||||| ||||| Sbjct 218 GAACAGGTTGTGCAGACCCTCGTTGTCCTTCGCGAGCAGCGTCATGTGCGTGTACGCACC 159 Query 40053 CCGACCGCTCACGTCGTACCGCTTCTGCTCGGGCGTGCCCCA-CTGGACCCGCTCCTGGT 40111 || | ||||||| || |||| | || ||||| | | | || || ||||| Sbjct 158 GCGCGCCGAGACGTCGTCGGACTCCTGCCCCTGC-TGCCCGAACCGCACGCGGGTCTGGT 100 Query 40112 CGGAACGGTGC---CCCGGTGCGACGTACGCCTCGATCCCGATGATGGGCTTGACCCCAG 40168 || | ||| | ||||| | |||||||||||||| |||||||| ||||||| || Sbjct 99 CGAACCGGCTCGTGCCCGGCGTGACGTACGCCTCGACGCCGATGATCGGCTTGATGCCCT 40 Query 40169 CGGCCTGCCCCTGCGTGAAGAAGTCGTACGCACC 40202 |||||| || ||| |||| ||| |||| || Sbjct 39 TCGCCTGCGCCCGCGACCAGAACTCGAACGCCCC 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159706270722456