Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177915.1_202017-04-
25] 4,708 sequences; 12,504,838 total letters
Query= NC_028892.1
Length=49949
Score E
Sequences producing significant alignments: (Bits) Value
seq2584 520 3e-143
seq752 192 2e-44
seq710 125 2e-24
seq1079 98.7 3e-16
>seq2584
Length=593
Score = 520 bits (576), Expect = 3e-143
Identities = 456/568 (80%), Gaps = 0/568 (0%)
Strand=Plus/Minus
Query 38111 CGAACTCCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGGAGGTCGG 38170
||||||||||| | || | ||| ||||||||||||||| ||||| || || |||||||
Sbjct 593 CGAACTCCTTGTCGAGGATCTCCTTCTTCTTCTTGCCCATCGCGCGCCGCAGCAGGTCGG 534
Query 38171 CCTGACCGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGA 38230
|||| ||||| | ||||||||| ||||||||||| ||| |||| ||||||||||||||||
Sbjct 533 CCTGTCCGAGCGAGTACCCGGCGAGGATCTGCGCGGCCCTCTGGACCTGCTCCTGGTAGA 474
Query 38231 TGATGAGCCCGAAGGTCGGGTCCAGGATCTCGGCCAGCGGCTCCTCCACCTCGGGGTGGA 38290
|||||| ||| ||||| ||| |||||||| || || |||| ||| | ||| |||||||
Sbjct 473 CGATGAGGCCGTAGGTCTCGTCGAGGATCTCCGCGAGGGGCTGCTCGAGCTCCGGGTGGA 414
Query 38291 TCGGCGTGATCTCCTGCTGACCGTTCTTGCGGAGGGCGTAGTTCGTGTGCGAGCCCATGC 38350
| ||| ||||| |||| | ||||||||||| || |||||||||||||||||| |||||
Sbjct 413 TGGGCTCGATCTTCTGCAGCCCGTTCTTGCGCAGCGCGTAGTTCGTGTGCGAGTTCATGC 354
Query 38351 CCATCGGACCCGGACGGTACAGCGCGACGACGGCCGAGATGTCCTCGAACTGGTCCGGCT 38410
||||||| ||||| ||||||||||||| ||||||||||| ||| ||||||| ||||||||
Sbjct 353 CCATCGGGCCCGGGCGGTACAGCGCGATGACGGCCGAGAGGTCGTCGAACTTGTCCGGCT 294
Query 38411 TCAGCAGGCGAAGCAGGGAGCGCATCGCGCCGCCGTCGAGCTGGAAGACCGAGAGGGTGT 38470
||| | |||| || || | |||||| | |||||||||||||||||| || ||| ||||
Sbjct 293 TCATCTGGCGCAGGAGCGCGCGCATGGGGCCGCCGTCGAGCTGGAACACGCCGAGCGTGT 234
Query 38471 CGCCCCTGGCCAGCAGCTCGTAGGTTGCCGGGTCGTCCAGCGGGATGTTCTCGATGTCGA 38530
| || | || ||||||||||| | ||| |||||| |||| || |||||| ||||
Sbjct 233 CACCGCGCGCGAGCAGCTCGTACGACGCCTTGTCGTCGAGCGTGAGCGACTCGATCTCGA 174
Query 38531 CGTGCTCACCACGGTTGCGGCGGATGTTCTCGACCGCGTCGCCCATGATCGTGAGGTTCC 38590
|||| | ||| ||||||||||| ||||||| | | ||||||||||||||
Sbjct 173 TCGGCTCCTTGCCGTTCATCTCGATGTTCTCGAGCGCGTCGTCGAGGATCGTGAGGTTCC 114
Query 38591 GGAGCCCGAGGAAGTCCATCTTCAGCAGGCCCAGGGCCTCGCAGCTCGGGTAGTCGAACT 38650
| |||||||||||||||||||| | ||||| ||| ||||| | |||||||||||||||
Sbjct 113 GCAGCCCGAGGAAGTCCATCTTGATGAGGCCGAGGCCCTCGGACGTCGGGTAGTCGAACT 54
Query 38651 GCGTGATCGTCACGCCGTCCGCAGGCCG 38678
| ||||| | |||||||| ||| ||
Sbjct 53 GGGTGATGACCGCGCCGTCCTGAGGACG 26
>seq752
Length=287
Score = 192 bits (212), Expect = 2e-44
Identities = 196/253 (77%), Gaps = 2/253 (1%)
Strand=Plus/Minus
Query 37836 CACGTCGGGCGGCAGGACCCGAAGGCCCATGCGCCTGCACTCGCCGAGGTACGTGGCCAT 37895
|||||| ||||| || || | | |||||||| ||||||| |||||| |||||
Sbjct 260 CACGTCCGGCGGGAGCACGGTGATGTGCATGCGCCGGCACTCGTTGAGGTAGAGGGCCAG 201
Query 37896 CTTGTTCTTGTCGTCGCCCACCGAGGTG-AGCACGGCCGCCATGTACTCGGCCGGGTAGT 37954
||||| ||||||||||| ||| | || || | |||||||||||||| | ||||||||
Sbjct 200 CTTGTCCTTGTCGTCGCGCAC-GCTCTGCAGGAGCGCCGCCATGTACTCCGTCGGGTAGT 142
Query 37955 GCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGTCCGTACGCCGCAGAGTGCGCCTTGT 38014
|| ||| ||| ||||||| | ||| || | ||| |||||| | || |||||||||||||
Sbjct 141 TCGCCTTGAGGAACGCCGTCCAGTACGCCACGAGGCCGTACCCGGCGGAGTGCGCCTTGT 82
Query 38015 TGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCCCACACCGCCCGGATGGCAGCCTCCG 38074
|||||||||| || ||||| || || ||| |||||| |||||| |||| || || || |
Sbjct 81 TGAAGGCGTAGCCCGCGAACGGGACCAGCGTGTCCCAGACCGCCTGGATCGCGGCGTCGG 22
Query 38075 AGTAGCCTCGCTC 38087
|||| || |||||
Sbjct 21 AGTACCCGCGCTC 9
>seq710
Length=223
Score = 125 bits (138), Expect = 2e-24
Identities = 116/147 (79%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 39189 GGCCAGCGAGCCAGCCGCAGAGCCGCGCCCAGGGCCGACCCACACGCCGTTCTCCTTCGC 39248
||||| ||||| || || ||||| || || |||||||| | | ||| | ||||| ||
Sbjct 1 GGCCATGGAGCCCGCGGCCGAGCCACGGCCCGGGCCGACGCGGATGCCCTGGTCCTTGGC 60
Query 39249 CCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGATCAT 39308
|||| ||||||||||||||| |||||||||||| |||||| ||||||||| |||| |
Sbjct 61 CCAGTTGATGAAGTCGGCGACCACGAGGAAGTACCCCGGGAAGCCCATCTGGATGATGAC 120
Query 39309 GTCGATCTCGTACTCGACCTGCGTGCG 39335
||| ||||||||| ||||| ||||
Sbjct 121 CTCGGTCTCGTACTGCGCCTGCTTGCG 147
>seq1079
Length=254
Score = 98.7 bits (108), Expect = 3e-16
Identities = 152/214 (71%), Gaps = 5/214 (2%)
Strand=Plus/Minus
Query 39993 GAACAGGTTGTGCAGGCCGGTCTTGTTCGTGGCGAGCATGGTCATGTGGGTGTAGGCACC 40052
||||||||||||||| || |||| | | ||||||| |||||||| ||||| |||||
Sbjct 218 GAACAGGTTGTGCAGACCCTCGTTGTCCTTCGCGAGCAGCGTCATGTGCGTGTACGCACC 159
Query 40053 CCGACCGCTCACGTCGTACCGCTTCTGCTCGGGCGTGCCCCA-CTGGACCCGCTCCTGGT 40111
|| | ||||||| || |||| | || ||||| | | | || || |||||
Sbjct 158 GCGCGCCGAGACGTCGTCGGACTCCTGCCCCTGC-TGCCCGAACCGCACGCGGGTCTGGT 100
Query 40112 CGGAACGGTGC---CCCGGTGCGACGTACGCCTCGATCCCGATGATGGGCTTGACCCCAG 40168
|| | ||| | ||||| | |||||||||||||| |||||||| ||||||| ||
Sbjct 99 CGAACCGGCTCGTGCCCGGCGTGACGTACGCCTCGACGCCGATGATCGGCTTGATGCCCT 40
Query 40169 CGGCCTGCCCCTGCGTGAAGAAGTCGTACGCACC 40202
|||||| || ||| |||| ||| |||| ||
Sbjct 39 TCGCCTGCGCCCGCGACCAGAACTCGAACGCCCC 6
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 159706270722456
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |