Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177915.1_202017-04-
25] 4,708 sequences; 12,504,838 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq1375 154 3e-32
seq1667 140 8e-28
seq1754 138 3e-27
seq3124 134 3e-26
seq2322 107 4e-18
>seq1375
Length=22668
Score = 154 bits (170), Expect = 3e-32
Identities = 160/210 (76%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964
||||||||||||||||||||| ||||| || || || |||| || || || ||||||||
Sbjct 12103 GACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTC 12162
Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024
|| ||||| || || || || | | ||| ||||| ||||||| ||||||||||| ||
Sbjct 12163 TAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTG 12222
Query 211025 GATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTT 211084
|| || || ||||| || || |||||||| ||||||||| || || || |||||
Sbjct 12223 AATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTT 12282
Query 211085 TCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || ||||| ||||| | |||||
Sbjct 12283 ACCTGTCAGTGTCTTGACAAAAATTTGCAT 12312
Score = 152 bits (168), Expect = 1e-31
Identities = 156/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||||||||| || || ||||||||||| || || | | ||| || || ||||| |||||
Sbjct 12793 GTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAGCTG 12852
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || || ||||| | | ||||| || ||||| | ||||||||||||||||| ||
Sbjct 12853 CTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTT 12912
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
|| ||||| ||||| ||||| ||| ||||||||| | |||||| || || || ||
Sbjct 12913 CGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGT 12972
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
| |||||| ||||| | ||||||
Sbjct 12973 CAAAGTCTTAACAAAGATCTGCAT 12996
Score = 131 bits (144), Expect = 4e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977
|| |||||||| || ||||||||||| | || || || || |||||||| ||||| ||
Sbjct 12572 GTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCG 12631
Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037
|| || || | | |||||| || ||||||| ||||||||||| || || || |||
Sbjct 12632 GCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTACTTTTG 12691
Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097
||||| || || ||||| || ||||||||| || || || ||||| || || |||||
Sbjct 12692 ACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTT 12751
Query 211098 TTTACAAACACCTGCAT 211114
|| || || | |||||
Sbjct 12752 TTGACGAAAATTTGCAT 12768
Score = 127 bits (140), Expect = 5e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956
|| ||||| ||||| || | |||||||| || || ||||| ||||| | || || ||
Sbjct 13007 AGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTA 13066
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
|| ||||| |||||||| || || ||||| | | |||||| || ||||| | ||||||
Sbjct 13067 CCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCC 13126
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
||||| || || || || ||||| |||||||| || || |||||| || | ||
Sbjct 13127 TTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTT 13186
Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || || | |||||| || || | ||||||
Sbjct 13187 ATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 13224
Score = 120 bits (132), Expect = 7e-22
Identities = 149/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||||||||| || || ||||||||||| || || | | ||| || |||||||| || ||
Sbjct 12337 GTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAGTTG 12396
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || || || || | | ||||| || ||||| | ||||| || || || |||||
Sbjct 12397 CTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAATCTT 12456
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
||| ||||| || || ||||| || ||||||||| || || || ||||| || ||
Sbjct 12457 ACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGT 12516
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
||||| || || || | |||||
Sbjct 12517 TAGAGTTTTGACGAAAATTTGCAT 12540
>seq1667
Length=53769
Score = 140 bits (154), Expect = 8e-28
Identities = 155/207 (75%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | ||| | |||||| |||||||| ||||| || || | | ||| || ||
Sbjct 17757 TCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 17698
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||||| ||||| || || ||||| | | |||||||||||| || | ||||||||
Sbjct 17697 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 17638
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| || |||||| || || || || || |||||||| |||||| || | ||||||
Sbjct 17637 GTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 17578
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105
||||| || || | |||||| |||||
Sbjct 17577 GGTCTTACCAGTCAAAGTCTTGACAAA 17551
>seq1754
Length=22642
Score = 138 bits (152), Expect = 3e-27
Identities = 162/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | ||| ||||| || || ||||||||||| || || | | || || ||
Sbjct 13970 TCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACC 14029
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|||||||| ||||| || || ||||| | | |||||||||||| |||| ||||||||
Sbjct 14030 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTT 14089
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| |||||||| || || || || || |||||||| |||||| || || || ||
Sbjct 14090 GTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAAT 14149
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
||||| || || | |||||| || || | ||||| ||
Sbjct 14150 AGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 14188
>seq3124
Length=64155
Score = 134 bits (148), Expect = 3e-26
Identities = 154/207 (74%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | || | |||||| || ||||||||||| || || | || || || ||
Sbjct 46623 TCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACC 46682
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||||| ||||| || || ||||| | | |||||||||||| || | ||||||||
Sbjct 46683 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 46742
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| |||||||| || || || || ||||||||||| |||||| || | ||||||
Sbjct 46743 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 46802
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105
||||| || || | |||||| || ||
Sbjct 46803 GGTCTTACCAGTCAAAGTCTTAACGAA 46829
>seq2322
Length=288
Score = 107 bits (118), Expect = 4e-18
Identities = 130/177 (73%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||||||||| || || ||||||||||| || || | | ||| || |||||||| || ||
Sbjct 111 GTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAGTTG 170
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || || || || | | ||||| || ||||| | ||||| || || || |||||
Sbjct 171 CTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAATCTT 230
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCC 211087
||| ||||| || || ||||| || ||||||||| || || || ||||| ||
Sbjct 231 ACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCC 287
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159082078502420
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |