Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177915.1_202017-04- 25] 4,708 sequences; 12,504,838 total letters Query= NC_030917.1 Length=93577 Score E Sequences producing significant alignments: (Bits) Value seq731 313 1e-80 seq2953 136 2e-27 seq3645 107 1e-18 >seq731 Length=840 Score = 313 bits (346), Expect = 1e-80 Identities = 287/360 (80%), Gaps = 2/360 (1%) Strand=Plus/Minus Query 78555 ACGAGGCGTTCCGTTGGTCGGAGGAGAACGAGTACCTGCAGCGCAAGGCCCAGATCGTCC 78614 |||| |||||||| ||||||||||||||| | |||| |||||||||||| |||||||| Sbjct 362 ACGACGCGTTCCGCTGGTCGGAGGAGAACCCGAACCTCCAGCGCAAGGCCGAGATCGTCA 303 Query 78615 TGGACTACTACCGCGGCGACGACCCCTTGAAGCGGAAGGTGGCCAGTACGCTCCTGGAGG 78674 ||||||||||| |||||| || | ||||| ||||| || || ||||| || ||| Sbjct 302 TGGACTACTACAAGGGCGACTCGCCGCTCAAGCGCAAGGTCGCGAGCACGCTGCTCGAGT 243 Query 78675 GCTTCCTCTTCTACTCGGGCTTCTACCTGCCGATGTACTGGTCGAGCCGCGCCAAGCTGA 78734 |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| Sbjct 242 CATTCCTCTTCTACTCCGGCTTCTACCTGCCGATGTACTGGTCGTCGCGCGCCAAGCTGA 183 Query 78735 CGAACACCGCGGACGTGATCCGGTTGATTATCCGAGACGAAGCAGTTCATGGGTACTACA 78794 ||||||| || ||| | ||||| | || ||||| ||||| || || || |||||||||| Sbjct 182 CGAACACGGCCGACCTCATCCGCCTCATCATCCGCGACGAGGCCGTGCACGGGTACTACA 123 Query 78795 TCGGATACAAGTACCAGCGAGGCCTCGAGACCCAGGGGCCGGCGCGGCAGGCTGAGCTCA 78854 |||| ||||||| |||| || ||||||| | |||| | || | ||||||| Sbjct 122 TCGGCTACAAGTTCCAGAAGGGTCTCGAGAAGCTCTCCCCGGAGGAGCGCGACGAGCTCA 63 Query 78855 AGGAGTACACGTTCGATCTGCTCTCGGAGCTCTACGACAACGAGTGTG-ACTACACCGAG 78913 ||| |||||||||||| ||||||| ||||| ||||| |||||| ||| | ||||| ||| Sbjct 62 AGGCGTACACGTTCGAGCTGCTCTTCGAGCTGTACGAGAACGAG-GTGCAGTACACGGAG 4 Score = 286 bits (316), Expect = 2e-72 Identities = 254/318 (80%), Gaps = 0/318 (0%) Strand=Plus/Minus Query 78221 GCCATCAACTGGAACAAGGTCACCGACGAGGTCGACGACACCGTGTGGGATCGACTCACC 78280 || |||||||||||| || |||||| ||| | |||||||| || ||| | Sbjct 747 GCGATCAACTGGAACCGTCTCGAGGACGAGAAGGACCTCGAGGTGTGGGACCGCCTCGTC 688 Query 78281 GGCAACTTCTGGTTGCCCGAGAAGGTACCGGTGTCCAACGACATCCCATCCTGGGACACC 78340 || ||||||||| |||||||||| || |||||||| |||||||||| || ||| |||| Sbjct 687 GGGAACTTCTGGCTGCCCGAGAAAGTGCCGGTGTCGAACGACATCCAGTCGTGGAACACG 628 Query 78341 CTTACGCCGGAAGAGAAGGAACTCACTATGCGTGTGTTCACCGGCCTCACCCTGCTCGAC 78400 || || || | ||| |||| ||||| ||||| || ||||||||||| || ||||| ||| Sbjct 627 CTCACCGCGCAGGAGCAGGAGCTCACGATGCGCGTATTCACCGGCCTGACGCTGCTGGAC 568 Query 78401 ACCATCCAGGGCACAGTTGGCGCCATCTCGCTCATCGCCGACGCCAACACCCCGCACGAG 78460 || ||||||||||| || ||||| | ||||||||| ||||||| | ||| ||||||||| Sbjct 567 ACGATCCAGGGCACGGTCGGCGCGGTGTCGCTCATCCCCGACGCGATCACGCCGCACGAG 508 Query 78461 GAGGCGGTGCTCACCAACATCGCGTTCATGGAGTCGGTACACGCCAAGTCCTACAGCTCG 78520 || |||||| ||||||||||||||||||||||||||| ||||||||| |||| ||| Sbjct 507 GAAGCGGTGTACACCAACATCGCGTTCATGGAGTCGGTGCACGCCAAGAGCTACTCGTCG 448 Query 78521 ATCTTCTCAACGCTATGC 78538 |||||||| ||||| ||| Sbjct 447 ATCTTCTCGACGCTGTGC 430 >seq2953 Length=185 Score = 136 bits (150), Expect = 2e-27 Identities = 141/185 (76%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 69703 CGGTCGCGAACTTCACCGTCGCGTCGACCCCGCGGTACTTCGACAAGCAGTCGAACGAGT 69762 |||| || |||||||| || ||||| || |||||| ||||||| ||||||||||||| Sbjct 185 CGGTGGCCAACTTCACGGTGGCGTCCACGCCGCGGACCTTCGACCGCCAGTCGAACGAGT 126 Query 69763 GGAAGGATGCCGAGGCACTCTTCCTGCGCTGCAACGTCTGGCGCGAGTACGCCGAGAACG 69822 ||||||| | || | || ||| |||||||| ||||||||||| ||| ||||||| Sbjct 125 GGAAGGACGGGGACACCCTGTTCATGCGCTGCTCGATCTGGCGCGAGGCCGCGGAGAACG 66 Query 69823 TGACTGAGTCGCTCCAGAAGGGCGCCCGCGTCATCGTCCAGGGCAAGCTCAAGCAGCGGT 69882 | | |||||||| ||||||| ||||||||||| |||||| ||| ||||| | Sbjct 65 TCGCGGAGTCGCTGACGAAGGGCATGCGCGTCATCGTGCAGGGCCGCCTCGTCCAGCGCT 6 Query 69883 CCTAC 69887 | ||| Sbjct 5 CGTAC 1 >seq3645 Length=349 Score = 107 bits (118), Expect = 1e-18 Identities = 92/114 (81%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 69624 ATGGCAAATGACACCGTCATCACCGTCATCGGTAACCTGACCGCCGACCCCGAACTCCGG 69683 |||||| ||||||||||||||| || ||||| ||||| || | ||||| || || || Sbjct 116 ATGGCAGGTGACACCGTCATCACGGTGATCGGGAACCTCACGGGAGACCCGGAGCTGCGT 57 Query 69684 TTCACGCCCTCCGGTGCCGCGGTCGCGAACTTCACCGTCGCGTCGACCCCGCGG 69737 ||||| ||||| ||||| ||||| || |||||||| || ||||| || |||||| Sbjct 56 TTCACCCCCTCGGGTGCGGCGGTGGCCAACTTCACGGTGGCGTCCACGCCGCGG 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299304425300744