Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177925.1_202017-04- 25] 4,783 sequences; 12,046,303 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq3030 102 8e-17 >seq3030 Length=7445 Score = 102 bits (112), Expect = 8e-17 Identities = 282/432 (65%), Gaps = 8/432 (2%) Strand=Plus/Plus Query 16202 CACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAAC 16261 || || |||||| || | ||||||||||| | ||| | |||||||||||| ||||| Sbjct 456 CATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAAAAGGTTAAA 515 Query 16262 CCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAAT 16321 || ||||| | |||| || || |||||||| || | ||||| || || || || || Sbjct 516 CCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCGGAGAAAAAG 575 Query 16322 ATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGA 16381 | ||| |||| || ||||| || | || || ||| | || || || | || Sbjct 576 ACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCAGCGTCTTGA 635 Query 16382 ATCCATTTCTGTACCCATTCGGCTTTTT----GTTTTATACAATCCATCGTTTCTATGGC 16437 |||||| | |||||||||| || | | ||| | || || | ||||| Sbjct 636 ATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCT----GGGATGGTGTGAATGGC 691 Query 16438 CTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTA 16497 || ||||| || |||| | | || | || || ||||| |||| || ||| Sbjct 692 ATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGATCAACAAGGAGTA 751 Query 16498 CATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGC 16557 |||| ||||| || || || || || || || || ||||| | ||||| | Sbjct 752 AGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTTTGCCTCTGG 811 Query 16558 TATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGC 16617 ||||| ||||| | |||| ||| ||| ||| ||||| || ||||||||| || Sbjct 812 AATTTGGACTTCGGTGGAAAAGTTTTCAACCAAGTTTTCATTAACAATACCGTCAGAAGC 871 Query 16618 AGCAAAAAACGC 16629 || ||||| || Sbjct 872 GGCGAAAAAGGC 883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511383823811560