Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177925.1_202017-04-
25] 4,783 sequences; 12,046,303 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq2870 136 8e-27
seq3030 125 1e-23
>seq2870
Length=15130
Score = 136 bits (150), Expect = 8e-27
Identities = 232/335 (69%), Gaps = 20/335 (6%)
Strand=Plus/Minus
Query 35295 ATACAGACGCCAAAGAATTGGCCAAG-AAGAAGATACACATCTGGAACGCTAATGGGTCG 35353
|||||||||| || |||| | || ||| | || | || ||| ||| |||||| ||
Sbjct 3175 ATACAGACGCTAACCTATTGTCTGAGCAAGGTGTTA-AGATTTGGGACGGTAATGGATCT 3117
Query 35354 CGGGAATTTTTGGACAGTAGAGGGTTATACGATAGAGCAGAGGGAGATTTGGGACCCGTA 35413
|| |||| ||| || | | ||||| | ||||| || |||||| |||| |||||
Sbjct 3116 CGTGAATATTTAGATAAGATGGGGTTCAAAGATAGGAAAGTAGGAGATCTGGGGCCCGTT 3057
Query 35414 TACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACCTGTTCTTCCGATTATACT 35473
|||||||| |||||| | |||||||||||| |||| | || || | ||| ||||||
Sbjct 3056 TACGGATTTCAATGGAGGCATTTTGGTGCTAAATACAAGACGTGCGATGACGACTATACT 2997
Query 35474 GGAAAGGGTATTGATCAATTG-GCCA--------ATATACTAAAGACCCTGAGAGAAAAT 35524
||| | ||||||||||||||| || ||| ||||||||| ||||
Sbjct 2996 GGACAAGGTATTGATCAATTGAAACAGGTTATTCATAAACTAAAGAC---------AAAT 2946
Query 35525 CCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGGCT 35584
|| | |||||||| || ||||||| || ||||| || ||| || || ||||||
Sbjct 2945 CCCTACGATAGAAGAATCATTATGAGTGCCTGGAACCCAGCTGATTTTGACAAAATGGCT 2886
Query 35585 CTTCCTCCATGCCACATGACTGCTCAATTTTATGT 35619
| || |||||||| || | | || || |||||
Sbjct 2885 TTGCCGCCATGCCATATTTTTTCACAGTTCTATGT 2851
>seq3030
Length=7445
Score = 125 bits (138), Expect = 1e-23
Identities = 297/444 (67%), Gaps = 15/444 (3%)
Strand=Plus/Minus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
||||||||||| | ||||||| |||| || ||| | || || ||||||||||||
Sbjct 601 GTTGCCTTTGCCTCCATTGAAGGTGTCTTTTTCTCCGGTTCCTTTGCCTCCATTTTCTGG 542
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
| || || || ||||| |||| ||| | |||| ||||| || || || | ||| |||
Sbjct 541 TTGAAAAAGAGAGGTATGATGCCCGGTTTAACCTTTTCCAACGAATTGATCTGTAGAGAC 482
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097
|||||| | || ||||||||||||| || |||| | |||| || | |
Sbjct 481 GAAGGTTTGCACACCGACTTTGCATGCTTGTTGTTCGCCCA----TTTGAAGA---ACAA 429
Query 102098 TCAAGAGAAAG-GATTCTTG---AAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATT 102153
| ||| || ||| ||| |||||||||| || || || |||||||||| ||
Sbjct 428 ACCAGACCCAGCCATTGTTGAAAAAATTGTCACCGAGGCTGTGGAAATTGAACAAAGATA 369
Query 102154 TCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTA 102213
|| | || | || ||| || | || |||||| | || |||| ||| ||
Sbjct 368 CTTCTTGGACGCCTTACCAGTTGCTTTGCTAGGTATGAACGCTGACTTAATGAACCAATA 309
Query 102214 CATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG--ACTAGAAAAGCACTATAAT 102271
| |||| || || || || | ||| ||||| | | || || ||||| |||| ||
Sbjct 308 CGTTGAGTTCGTCGCCGACAGACTGTTGGTCGCTTTCGGTAACAAGAAA--TACTACAAG 251
Query 102272 GTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTT 102331
|| ||||||||| |||||||| || || ||| | | |||||| ||||| ||
Sbjct 250 GTCGAAAACCCCTTCGATTTCATGGAAAACATCTCCTTGGCCGGTAAGACTAACTTCTTC 191
Query 102332 GAAAAGAGAGTCGCCGAGTATCAA 102355
||||||||||| | || || |||
Sbjct 190 GAAAAGAGAGTTTCTGACTACCAA 167
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989523356127765
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |