Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177925.1_202017-04- 25] 4,783 sequences; 12,046,303 total letters Query= NC_011273.1 Length=164602 Score E Sequences producing significant alignments: (Bits) Value seq2261 275 7e-69 seq2388 176 5e-39 >seq2261 Length=307 Score = 275 bits (304), Expect = 7e-69 Identities = 245/307 (80%), Gaps = 0/307 (0%) Strand=Plus/Minus Query 153006 GGCGAGGGCGTAGCCGCCAAGGCGCTGCAGGCGCTCGACATCAACCTGGAGGAGGTGCGT 153065 |||||||| || || |||||||||||| || | |||| ||| ||| || | || || Sbjct 307 GGCGAGGGTGTCGCGGCCAAGGCGCTGGAGTCCCTCGGGATCTCCCTCGACGGCGTCCGC 248 Query 153066 GCCGAGGTCGAGGAGATCATCGGCCACGGCCAGCAGGCACCCACCGGGCACATCCCGTTC 153125 || |||| |||||||||||| | ||||||||||| || | |||||||||||||||| Sbjct 247 ACCCAGGTGACCGAGATCATCGGCGAGGGCCAGCAGGCCCCGAGCGGGCACATCCCGTTC 188 Query 153126 ACCGACCGCTCCAAGCGCGTCCTGGAGCTGTCGCTGCGCGAGGCGCTGCAGCTCGGCCAC 153185 || ||| ||||| || || ||||||||||||||||||||||| |||||||||||| Sbjct 187 ACGCCGCGCGCCAAGAAGGTGCTCGAGCTGTCGCTGCGCGAGGCGCTCCAGCTCGGCCAC 128 Query 153186 AACTACATCGGCACCGAGCATCTCCTGCTGGCCCTGATCCGCGAGGGTGAGGGCGTGGGC 153245 |||||||||||||||||||| ||||||| | ||| ||||||||||| |||||||| | | Sbjct 127 AACTACATCGGCACCGAGCACATCCTGCTCGGCCTCATCCGCGAGGGCGAGGGCGTCGCC 68 Query 153246 TGCCAGGTGCTGGTGAAGCGCGGCGCGGAGCTGACCAAGGTCCGCCAGGTGGTCATCCAG 153305 |||||| ||| |||| ||||| || || | |||||| |||||| |||||||||| Sbjct 67 GCCCAGGTCCTGACGAAGATGGGCGCCGACCTCAACAAGGTGCGCCAGCAGGTCATCCAG 8 Query 153306 CTGCTGT 153312 || |||| Sbjct 7 CTCCTGT 1 >seq2388 Length=201 Score = 176 bits (194), Expect = 5e-39 Identities = 162/203 (80%), Gaps = 4/203 (2%) Strand=Plus/Minus Query 156600 GTTCGACAACGAGCAGGAGTACACCCAGGACCTCTACGACGCCACCGGCCAGACCGAGGA 156659 || ||| |||||| | ||||||| ||||||||||||||| | ||| | ||||||||| Sbjct 201 GTACGAGAACGAGGTGCAGTACACGGAGGACCTCTACGACGGCGTCGGGCTGACCGAGGA 142 Query 156660 CGTGAAGAAGTTCCTGCGGTACAACGGCAACAAGGCCCTGCAGAACCTGGGCTACGACGC 156719 ||| |||||||||||||||||||||| ||||||||| || |||||| |||||||| || Sbjct 141 CGTCAAGAAGTTCCTGCGGTACAACGCCAACAAGGCGCTCATGAACCTCGGCTACGAGGC 82 Query 156720 GCTGTTCAGCCGCAG--CGACTGCGACGTCAACCCGGCCATCCTGAGCGCGCTGTCGCCC 156777 ||| ||| || || ||| ||||||||||||||| ||||| ||||||||||| Sbjct 81 GCTCTTC--CCCAAGGACGAGACCGACGTCAACCCGGCGATCCTCTCGGCGCTGTCGCCG 24 Query 156778 GGTGGAGACGAGAACCACGACTT 156800 | ||||||||||||||||| Sbjct 23 AACGCCGACGAGAACCACGACTT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 526566915998160