Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177925.1_202017-04- 25] 4,783 sequences; 12,046,303 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq2891 268 1e-66 seq3421 159 4e-34 >seq2891 Length=7749 Score = 268 bits (296), Expect = 1e-66 Identities = 893/1372 (65%), Gaps = 42/1372 (3%) Strand=Plus/Plus Query 105953 GGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCC 106012 ||||| || |||||||||| |||||| ||||| | ||||| || || |||||||||||| Sbjct 4909 GGTTCGAAACATTCATTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCC 4968 Query 106013 ATCA--AAAGACTGTTACGAAGACCCTTTTCCTTGATG-CGTTCCTTGAGAACATCCCAG 106069 || || || | | | || ||| | | | |||| | || ||| || ||||| Sbjct 4969 ATGGTCAAGGAATTT--CTAATACCATGCTTCATGATATCTTTTCTTAAGGTG-TCCCAA 5025 Query 106070 TCGTAGTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTG 106129 || | || | || || |||||||||||||| || || | ||||| || | Sbjct 5026 TCCCACATGCCGTAGGGTTTTTGGTCCCACATATCAAACTGTAGTATACCTTGAGAAGCA 5085 Query 106130 GGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTC--AGCCAATTCACAGCTCGCCT 106187 ||||| || | || || || || | ||| | |||| ||| | |||||| || | Sbjct 5086 GGAGATCCTTGGAAAGTTTCGTATGGACCGTC--CTTCTGAGCTAGTTCACAAGAAGCTT 5143 Query 106188 CCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTG 106247 ||| ||| || ||||| || ||||||||||| | ||| | | |||||| || | Sbjct 5144 CCATGGAGGCATGATAAATAGTTTCAAAGATTTGGATATTTAGCAAACGGGCTTCCTCAG 5203 Query 106248 AATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAA 106307 ||||||||| | || ||| || || || ||||||||||||||||||||| ||| Sbjct 5204 AATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAA 5263 Query 106308 TAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAA 106367 | ||||| |||| |||||| || |||| ||| ||||| || || |||| | |||| Sbjct 5264 TTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAA 5323 Query 106368 TGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAA 106427 |||||| ||||| ||| ||||||| || | |||||||| | ||||| | | Sbjct 5324 TGACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCATGTAATTTTTTGAAGTTGT 5383 Query 106428 AAGTGCGAGTCT---------------CTTCATTGACATACTTTGGAAGGGCGATTGATG 106472 | ||| ||||| |||| ||| || | ||| | ||| | || | Sbjct 5384 ATGTGGAAGTCTTACCATCCTCAGAAGTTTCAATGA-ATGC--TGGTAAGGCAACGGAAG 5440 Query 106473 CCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGT 106532 |||| || |||||||| || ||||| | ||| ||| || | |||||| || |||| Sbjct 5441 CCAAGTTACAAACAGCTGTTTCATCTGGAGCTGAGTATTCAACAATTTCACAGCATAAGT 5500 Query 106533 TGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGT 106592 | || ||| || || || || ||||| ||| ||| |||| || |||||||||| Sbjct 5501 TTGATGACTTGATGACACCTAAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGT 5560 Query 106593 AGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACATCGG 106652 | | | | | || || || || || || || | | | ||| | | ||| | || Sbjct 5561 AAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAAATGGAATACCATA-ATTTT 5619 Query 106653 CGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAA 106712 || | | || | || | || || || |||||| || || || || |||| Sbjct 5620 TGG--GCTTTGATAGTCTTACCACGACCTTCTTTCTCGTAGCGGGTATATAGAGCCTCAA 5677 Query 106713 ACTCCTCACCCACCGCGTCGGAGAGACCTGGTGC-CTTGTCTGGACAGAAAAGAGACCAT 106771 |||| ||||| ||| | ||| || || ||| |||| |||| | | ||| Sbjct 5678 ACTCGTCACCGTAACAATCGCTTAAACCAGGAGCTGATGT-TGGAGAGAATAATGTCCAG 5736 Query 106772 TGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGA 106831 ||| || || || |||||||||||||| || |||||||| || | | || | | Sbjct 5737 GTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAA 5796 Query 106832 TCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA-CTCAAGGAACTCCATGAT 106890 ||||| ||| || || | ||| ||||| || ||| |||| || || | ||| Sbjct 5797 TCTCTTGCACGAATTTCCTCTTTACCGTGGTT-CTTCCTAATATCAATAAAATCAAAGAT 5855 Query 106891 ATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTT 106946 ||| || |||||||| || || || | || | | || |||| | ||| | | Sbjct 5856 ATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTT-TATTACCACCCT 5914 Query 106947 GATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATT 107006 | | ||||| || || ||| || || || |||| ||| ||||| | ||| | || Sbjct 5915 GGTCAACATAACGGGCGGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAG 5974 Query 107007 GACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAA 107066 ||| ||||| || ||| ||| | | | | | | |||||| || | |||| Sbjct 5975 TACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAA 6034 Query 107067 TACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGA 107126 |||| ||||| || || || ||||| ||| | | || | || || || | || Sbjct 6035 TACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGA 6094 Query 107127 TTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAG 107186 | ||||||||||| |||| | | ||| ||| |||||| || ||| |||| ||||| | Sbjct 6095 TAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGG 6154 Query 107187 CATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-GGGACATCTTGTCGTATGTC 107245 ||||||| | ||||| | |||||| | || ||| || | |||||| || || || Sbjct 6155 CATTGAACAACGTTGGAGAGGCGTGAGT-AAAATATTTTAGAGACATCAAGTTATACGTT 6213 Query 107246 TCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAA 107297 || || ||| || || ||| ||||||||||| | || || | ||||| Sbjct 6214 TCTAAAGCAGCCTCGATATCTCTACCGTGGATGCCTAGTGCGACTCTCATAA 6265 >seq3421 Length=24567 Score = 159 bits (176), Expect = 4e-34 Identities = 872/1371 (64%), Gaps = 44/1371 (3%) Strand=Plus/Plus Query 105953 GGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCC 106012 ||||| || |||||||||| ||| | ||||| | || ||||| ||||||||||||||| Sbjct 5782 GGTTCGAAACATTCATTATAACCAAGAATTTGGGAAGTTGAGGCGGTTGGCATTGGTGCC 5841 Query 106013 ATCA--AAAGACTGTTACGAAGACCCTTTTCCTTGATG-CGTTCCTTGAGAACATCCCAG 106069 || ||||| ||| | | || | || ||| | || ||| || |||||| Sbjct 5842 ATAGTCAAAGA--GTTTCTTAACCCGTGTTTAACAATGTCCTTTCTTAAGGTT-TCCCAG 5898 Query 106070 TCGTAGTTGAGCT-TGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGT 106128 || | || |||||| | |||| ||||||| ||||| | | || | ||| | Sbjct 5899 TCCCACATGCCAAATGGTTTAGCGTTCC-ACATATCGAATTGTAAAATACCCTTGGAAGC 5957 Query 106129 GGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTC 106188 |||||||| ||||| || ||| ||||| || |||||||||||| || || Sbjct 5958 TGGAGAACCTTCAAAAGTAGAATATTTACCTTCTTTTTGGGCCAATTCACAGGAGGCTTC 6017 Query 106189 CAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGA 106248 || | || || || || ||||| ||||| | || | | ||||| ||||| Sbjct 6018 AAGAGTAGCATGGTAAATAGTTTCGAAGATTTGTTTGTTTAGAGTTTGAGCTTCTTCTGA 6077 Query 106249 ATCAAATGCGTAG-CGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAA 106307 ||||| | |||| || ||| ||| | ||| || | ||| || ||||| | | ||| Sbjct 6078 TTCAAA-GGGTAGACGCAACATCATATAAGTATCGGCCAAACCCTGGACACCAAGAGCAA 6136 Query 106308 TAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC---AACGGGATAAAAATTTCTGT 106364 ||||||| || |||||| || |||| || ||| ||| ||||| |||| | || Sbjct 6137 TAGGTCTATGCTTCATATTTGAATTTC---TAGCCTCGGGAACTGGATAGTAATTACGGT 6193 Query 106365 CAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAAT 106424 | || |||| ||| | || | ||||| | || | || || || | | | || ||| Sbjct 6194 CGATAACTCTGTTCAAGTTGTGGGTAATGACTTTAGCAATCTCGTGTAATCTCTCGAAAT 6253 Query 106425 CAAA------AGTGCGAGTCTCTT------CATTGACATACTTTGGAAGGGCGATTGATG 106472 | | ||| | |||| | | || | || ||||| || || | Sbjct 6254 TATAGCTTGCAGTTTTACCATCTTCTGAAACCTCAACGAATGCCGGTAGGGCAATAGAAG 6313 Query 106473 CCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGT 106532 | ||||| ||||| || || |||||| | || || | ||||| ||| |||| Sbjct 6314 CTAAATTACAAACTGCAGTTTCATCCGGGGAGGAATATTCGACGATTTCACAACATAAGT 6373 Query 106533 TGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGT 106592 | || || || || || || |||| |||||| |||| |||| || || ||||| | Sbjct 6374 TAGATGATTTGATAGTACCTAAGTTCTGTTGGTTTGTCTTCCTGTTACATGCGTCCTTAT 6433 Query 106593 AGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTG-AGAATTGCCTTCCACACATCG 106651 | | |||| | || || || || || ||||||| |||| | ||| || | ||||| | Sbjct 6434 AAACCATGAAAGGTGTACCTGTTTCTGTCTGTG-CTTGCAAAATGGCATACCACAACTTT 6492 Query 106652 GCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCA 106711 ||| | ||| | || | || || || ||||| || || || ||||| Sbjct 6493 TGGGC---TTTAATTGTTTTACCACGACCTTCTCTTTCGTAACGAGTATATAGTTCTTCA 6549 Query 106712 AACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGAC-AGAAAAGAGACCA 106770 || || |||||| | | || | |||||| | | |||| | | || | || ||| Sbjct 6550 AATTCATCACCCCACACATCATCTAAACCTGG-GGCAGCACTGGGCGAAAACAAAGTCCA 6608 Query 106771 TTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAG 106830 | ||| |||| | ||| || ||||||||||| || || ||||| || | | || | Sbjct 6609 AGGCCCATCCTCTTGAACACGTTTCATGAAAAGATCAGGGATCCATAGAGCAGGGAACAA 6668 Query 106831 ATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGAT 106890 |||||| ||| ||||| | ||| || | || | || | || || | ||| Sbjct 6669 ATCTCTTGCACGAATTTCTTCCTTACCATGTGTTTTTCTGATATCGACAAAGTCGAAGAT 6728 Query 106891 ATCCGCGTGCCATGGCT-CAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCT 106945 ||| || |||||||||| ||||| | | |||| || || || | | ||| | Sbjct 6729 ATCTGCATGCCATGGCTCCAAGA-AAAGGGCGAAAGCACCAGGTCTCTTG-TTACCACCC 6786 Query 106946 TGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGAT 107005 || | ||||| || || || || || || |||| ||| ||||| | || | ||| Sbjct 6787 TGGTCCACATAACGGGCAGTATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAA 6846 Query 107006 TGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCA 107065 ||| || || || ||| ||| ||| | | | | ||| || | ||| Sbjct 6847 GTACCGTTGGTACCAGCGATATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACCA 6906 Query 107066 ATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTG 107125 | ||| || || || || || ||||| || | | ||| |||| ||||| | | Sbjct 6907 ACACCACCTGCAGTTTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTCG 6966 Query 107126 ATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCA 107185 || ||||| ||||| |||| || | ||| || ||||| || || ||| |||||| Sbjct 6967 ATAGAGTCATCCTTCATGGCAATTAAGAAACATGAAGACATTTGAGGATGTGGCGTACCA 7026 Query 107186 GCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-GGGACATCTTGTCGTATGT 107244 || ||||| | ||||| | |||||| |||| || ||| |||||| | || || Sbjct 7027 GCGTTGAATAAAGTTGGGGAAGCGTGAGTGAA-GTATCTTAACGACATCAAATTATAAGT 7085 Query 107245 CTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCAT 107295 || || ||||| || || || || ||||| || | ||||||||||| Sbjct 7086 CTTCAGTACAGATTCGATATCGCTACCATGGATACCTAGCGCCACACGCAT 7136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589945526522920