Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177925.1_202017-04- 25] 4,783 sequences; 12,046,303 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq3030 134 1e-26 >seq3030 Length=7445 Score = 134 bits (148), Expect = 1e-26 Identities = 561/878 (64%), Gaps = 27/878 (3%) Strand=Plus/Plus Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTC 23264 ||||||||| ||||| || || ||| | ||||||| || || |||||||| | Sbjct 152 CATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTACCGGC 211 Query 23265 TAATGATATATTTTCCATAAAATCAAATGGATTA--GAA---GTATTATATACAGCTTTA 23319 || || || |||||||| ||||| || || || || ||| ||| | | ||| Sbjct 212 CAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCTTG--TTA 269 Query 23320 CATGATAATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCA 23379 | | || || || || || || || || |||| ||||| ||| || ||| Sbjct 270 CCGAAAGCGACC---AACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTCA 326 Query 23380 TAGTTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAA 23439 ||| ||||||| | ||||| | || || | ||| || || |||||| Sbjct 327 GCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCCAAGAAGTATCTTTGTTCAATTTCC 386 Query 23440 ACAGCATCTTT---AATTATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATAC 23496 ||||| || | |||| ||| |||||| || || ||| | || |||| Sbjct 387 ACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCT---GGTTTGTTCTTCAAATGG 443 Query 23497 TTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTA 23556 ||||| || |||||||| || || | ||||| || |||| |||||||| || Sbjct 444 GCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTG 503 Query 23557 GAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGAT 23616 ||||| ||||| || ||||| | |||| ||||| | ||| || || | ||||| || Sbjct 504 GAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAA 563 Query 23617 CCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCA 23676 ||||| || || | ||| |||| | |||||||| || || | | |||||| || Sbjct 564 CCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCG 623 Query 23677 TTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCA----AT 23732 | | || ||||||| || | ||| | |||||| | || | | || Sbjct 624 TCAGCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTC----TCACCGATTTCTGGGAT 679 Query 23733 TGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAAT 23792 || | ||| || || || | || |||||| | || | || || ||||| || Sbjct 680 GGTGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGAT 739 Query 23793 TAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACA 23852 | || || ||||||| |||||||||||||| || || || || || |||| Sbjct 740 CAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACT 799 Query 23853 TCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAAT 23912 | || || | | ||| || || | |||| ||| | | || ||||| |||||||| Sbjct 800 CTTTGCCTCTGGAATTTGGACTTCGGTGGAAAAGTTTTCAACCAAGTTTTCATTAACAAT 859 Query 23913 ACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTAT--AAAATGTCTTTCATCAGTT 23970 ||| ||| ||| || || || |||||||| || ||||| ||| | ||| Sbjct 860 ACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTTTCGTT 919 Query 23971 GATAAT-TTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAA 24029 || | || ||||| |||| ||||| || || ||||||| ||| ||| | ||||| || Sbjct 920 CATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAA 979 Query 24030 ACTTGCCAAGGCACGCTTATACATTAGCCAAATATCAT 24067 | || ||||||||| || | |||| || |||| Sbjct 980 AGAAGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCAT 1017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521456821536200