Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177935.1_202017-04-
25] 2,167 sequences; 11,642,650 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq1868 125 6e-24
seq362 100 2e-16
seq1051 95.1 1e-14
seq327 82.4 6e-11
>seq1868
Length=22670
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||||||||| || ||||| |||| ||| ||| ||||||||||| || || |
Sbjct 10145 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 10086
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
|| | | |||| |||||||| || ||||| || ||||| | ||||| || |||||
Sbjct 10085 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGA 10026
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| ||| |||||||| |||||| |||||| | | |||| | || |||
Sbjct 10025 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACC 9966
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| | ||| || ||||| || ||||| ||||| ||||| ||||||||
Sbjct 9965 TCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 9919
Score = 111 bits (122), Expect = 1e-19
Identities = 163/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||||||||| || |||||||| || || ||||| || ||||||||||| |
Sbjct 9917 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 9858
Query 45170 A--GTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
| ||| | | |||| || || || || ||||| || ||||||| |||||| || ||||
Sbjct 9857 AAGGTT--CTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAG 9800
Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287
| | ||| ||||||||| ||||| |||||| | | |||| || |
Sbjct 9799 GGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAA 9740
Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|||| | || || || || || |||| |||||| |||||||| |||||
Sbjct 9739 CCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 9691
>seq362
Length=22573
Score = 100 bits (110), Expect = 2e-16
Identities = 165/236 (70%), Gaps = 4/236 (2%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||||||||| || |||||||| || || ||||| || |||||||||||| |
Sbjct 13875 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 13934
Query 45170 --AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
|||| | | | || |||| ||| || || || || ||||| | |||||||| || |
Sbjct 13935 AAAGTT--CTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 13992
Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287
| | ||| |||||||| || || ||| || | | |||| | || |
Sbjct 13993 GAATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 14052
Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTGCCT 45343
| |||| |||||| ||||| || || | |||||| || || |||||||| ||| ||
Sbjct 14053 CTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTTGGCT 14108
>seq1051
Length=28834
Score = 95.1 bits (104), Expect = 1e-14
Identities = 154/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||||||||| || || ||||||| ||| || || |||||||||||||| |
Sbjct 11052 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 11111
Query 45170 A--GTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
| ||| | | |||| |||| ||| || || || || ||||| | |||||||| || |
Sbjct 11112 AAGGTT--CTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 11169
Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287
| | ||| |||||||| ||| ||| ||| || | | |||| | || |
Sbjct 11170 GGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 11229
Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAA 45327
| |||| || || ||||| || |||| |||||| |||||
Sbjct 11230 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 11269
>seq327
Length=20421
Score = 82.4 bits (90), Expect = 6e-11
Identities = 152/221 (69%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC--GT 45167
|||||||| ||||| || ||||| || | ||| ||||| || ||||||||||| |
Sbjct 14668 CCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 14609
Query 45168 TCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
|||| | | |||| |||| ||| || || || || ||||| | |||||||| || |
Sbjct 14608 AGAGTT--CTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 14551
Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287
| | ||| |||||||| ||| ||| ||| || | | |||| | || |
Sbjct 14550 GGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 14491
Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAG 45328
| |||| || || ||||| || |||| |||||| || |||
Sbjct 14490 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAAG 14450
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395064765940507
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |