Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177935.1_202017-04- 25] 2,167 sequences; 11,642,650 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq1051 104 2e-17 seq1868 95.1 1e-14 >seq1051 Length=28834 Score = 104 bits (114), Expect = 2e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | | |||||| ||||| || | || |||||||||||||||||||| || Sbjct 11049 ATACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCA 11108 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || | | ||||| | ||| |||||||| |||| | | |||||||| || Sbjct 11109 GACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 11168 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||| ||||| ||||||| || | | |||| ||||| | ||||| Sbjct 11169 GGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCA 11228 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 114374 || |||| || | || || || |||| ||| || |||||| Sbjct 11229 ACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 11270 >seq1868 Length=22670 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | ||| || | || | ||||| || || || || |||||||||||||| Sbjct 9692 ATACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCA 9633 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || | ||||| || || ||||| || |||| | | ||||| || ||| Sbjct 9632 GACAGCGTTCTGCCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGA 9573 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT-TCAACGGTGTCGGTGGATTC 114331 || || ||||| ||||| ||| ||| | ||| | | || | ||| |||| ||||| Sbjct 9572 GGGATACCTTCCTTGTCTTGAAT-TTTCGACTTAACGTTGTCGATGGTATCGGAAGATTC 9514 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | ||||| ||||||| ||| || || ||||||||||| Sbjct 9513 AACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 9463 Score = 89.7 bits (98), Expect = 4e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 114168 CTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAA 114227 ||||| || | || | || || || |||||||| ||||| || || || | | | Sbjct 10589 CTCAAGACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA 10530 Query 114228 TCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTG 114287 ||||| ||||||||||| || |||| | | || ||||| |||||||| ||||| ||| Sbjct 10529 TCTTCTAGTTGTTTACCGGCAAAGATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTG 10470 Query 114288 TCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCAC 114346 || ||| ||| | ||| | | |||| ||||| | ||||| || || | ||| | Sbjct 10469 TCTTGAAT-TTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTAT 10411 Query 114347 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || || ||||| || || || ||||| ||||| Sbjct 10410 AGTCTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 10375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420123304119204