Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177935.1_202017-04- 25] 2,167 sequences; 11,642,650 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq1868 125 5e-24 >seq1868 Length=22670 Score = 125 bits (138), Expect = 5e-24 Identities = 169/232 (73%), Gaps = 10/232 (4%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| || || || || || || || || || || || || ||||| || | Sbjct 9919 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 9978 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| |||| || |||| | |||| || ||||| |||||| | || |||||||| Sbjct 9979 GACACTATTGACAACGTTAAGTCGAAAA-TTCAAGACAAGGAAGGTATTCCTCCAGATCA 10037 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGAC----GAACGCACTTTAGGCGATT 23785 ||| | || || |||||||| || |||||||||||| |||||| | | |||| Sbjct 10038 ACAAAGATTGATCTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCT----GATT 10093 Query 23786 ACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 | ||||| || |||||||| || || ||||| || || || ||| |||| || Sbjct 10094 ATAACATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 10145 Score = 113 bits (124), Expect = 3e-20 Identities = 166/232 (72%), Gaps = 10/232 (4%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || | || || ||||| || || | |||||||| || | Sbjct 9463 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 9522 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || | || || |||| | |||| || ||||| |||||| | || |||||||| Sbjct 9523 GATACCATCGACAACGTTAAGTCGAAAA-TTCAAGACAAGGAAGGTATCCCTCCAGATCA 9581 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGAC----GAACGCACTTTAGGCGATT 23785 ||| | || || |||||||| || || || |||||| |||||| | | |||| Sbjct 9582 ACAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGCAGAACGCTGTCT----GATT 9637 Query 23786 ACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||||||| || || |||||||| |||||| | || ||||| | |||| || Sbjct 9638 ACAACATTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGG 9689 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || ||||| || | || || ||||| |||||| | || ||||| ||| | Sbjct 9691 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 9750 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || || |||| | |||| | ||||| |||||| | || |||||||| Sbjct 9751 GACACGATCGATAACGTTAAGTCGAAAA-TCCAGGACAAGGAAGGTATCCCTCCAGATCA 9809 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||| | || || |||||||| || || || ||||||| | || || || ||||| Sbjct 9810 ACAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAA 9869 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| ||||| || || || | || || || || || ||| |||| || Sbjct 9870 CATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 9917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338000673060836