Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177945.1_202017-04- 26] 24,998 sequences; 12,874,792 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq4933 181 8e-41 >seq4933 Length=974 Score = 181 bits (200), Expect = 8e-41 Identities = 461/693 (67%), Gaps = 44/693 (6%) Strand=Plus/Minus Query 101676 TTTTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACT 101735 ||| ||| ||||||||||| ||| ||| | || ||||| || | |||||| || |||| Sbjct 922 TTTCAAG-GCATCAATGTGGTCTTTATAAACATGTGCATCCCCCAAAGTATGAATGAACT 864 Query 101736 CTCCAGGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAA 101795 | || ||| | | | || | ||||||||| | ||| || | || ||| |||| Sbjct 863 CACCTGGCTCCATGTCGACAACTTTAGCAATCATTCTAGTCAACAAAGCATATGATGCAA 804 Query 101796 TGTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAG-- 101853 |||||||||| ||||| |||||||||||| || | ||| |||| | || ||||| Sbjct 803 TGTTAAATGGTACTCCCAACCCCATATCACAAGAACGTTGGTACAATAAGCATGAAAGGC 744 Query 101854 ---------------CTT-TCCATC---------ACAGACATAAAATTGACTTAATACAT 101888 ||| ||| || || |||||| || || || | || Sbjct 743 GGGGCTTACCGGATCCTTCTCCTTCTTTGGGGAAACTGACATAGAACTGTGAAAAAATAT 684 Query 101889 GACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCC 101948 | || || ||||| ||||||| || || | ||||| |||| ||| | || | Sbjct 683 GGCATGGTGGCAAAGCCATTTTGTCAAAATCAGCTGGGTTCCAGGCACTCATAATGATTC 624 Query 101949 TTCTATCTGTAGGG-TTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCT 102007 ||||||| |||||| ||||| |||| ||| ||| | |||||| ||||| |||| ||| Sbjct 623 TTCTATC-GTAGGGATTTGTCTTTAGTTTATGAATAACCTGTTTCAATTGATCAATACCT 565 Query 102008 TCTCCTTTATAATCGCGCCCAACACCT-TTATATTCTGCTCCGAAATGCCTCCACTGAAA 102066 | ||| |||| ||| | ||| | || |||| || || ||||||||||| ||||| Sbjct 564 TGTCCAGTATAGTCGTCATCG-CACGTCTTGTATTTAGCACCAAAATGCCTCCATTGAAA 506 Query 102067 TCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAA 102126 |||||| || || || ||||||||| | | || || | || || | ||||||||| | Sbjct 505 TCCATAAACGGGCCCCAGATCTCCTACTTTCCTATCTTTGAACCCCATCTTATCTAAATA 446 Query 102127 TGATCTAGATCCATTCGCATCCCAAATGTGCACGCC-AGCT--GCTGATAGCTCTTTGCT 102183 | | ||||||||| | |||||||| | || || ||| | |||| || || Sbjct 445 TTCACGAGATCCATTACCGTCCCAAATCTTAACACCTTGCTCAGACAATAG--GTTAGC- 389 Query 102184 GTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATACTCT 102243 ||| ||| || | ||||||||| ||||| | | |||||| ||| || | Sbjct 388 GTCTGTATCACCGGCCAAAAACCACAATAGTTCAAGTATGATACCTCTAGTAAAGACCTT 329 Query 102244 CTTAGTAGTTAAAAGTGGAAA---TTCATTTTCTAAACTAAACCTAGACT---GTGTTCC 102297 ||| || |||| ||||| || |||| ||||||||| | || ||| | | Sbjct 328 CTTGGTCGTTAGTAGTGGGAAGGTATCATCACGTAAACTAAAACGCAGCTGGGGTGGTGC 269 Query 102298 AAAAATACTCAGTGTTCCAGTCCCTGTTCTGTC 102330 ||||| ||||| || ||||| |||||||| || Sbjct 268 AAAAAGACTCAACGTACCAGTGCCTGTTCTATC 236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361141140080498