Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177945.1_202017-04- 26] 24,998 sequences; 12,874,792 total letters Query= NC_009603.1 Length=46365 Score E Sequences producing significant alignments: (Bits) Value seq14786 262 1e-65 seq18065 188 2e-43 seq8964 176 1e-39 seq20451 174 5e-39 seq24856 131 5e-26 >seq14786 Length=380 Score = 262 bits (290), Expect = 1e-65 Identities = 223/272 (82%), Gaps = 2/272 (1%) Strand=Plus/Minus Query 42212 GTGACGGCGAGGAACGCGTCGAGCTTCGCAGGCGAGACGATGGCCATCATCCGCTCCTGC 42271 |||| |||||||||| ||||||||||| | |||| ||||| |||||||| ||||||||| Sbjct 380 GTGATGGCGAGGAACTCGTCGAGCTTCTCCGGCGCGACGACCGCCATCATGCGCTCCTGC 321 Query 42272 GACTCCGACATGAGGATCTCCTCGGCCGTGAGCGAGGGGTCGCGGAGGAGCACGTTGTCG 42331 ||||| |||||||||||||| | || |||||| |||||||| || || |||| |||| Sbjct 320 GACTCGGACATGAGGATCTCGCCCGCGTTGAGCGTCGGGTCGCGCAGCAGGACGTCGTCG 261 Query 42332 AGCGAGACGTGCATTCCGCTGTTGCCGTTGGCGGCGAGCTCGCTCGTGGCGCAGGAGATG 42391 ||| | |||||||| |||| || |||||| | ||||||||| ||| ||||| |||||| Sbjct 260 AGCCACACGTGCATGCCGCCGTCGCCGTTCGAGGCGAGCTCCGACGTCGCGCACGAGATG 201 Query 42392 CCTGCAGCCCCGAGGTCCTGGATCGCCTCGACCAGCT-CGTCGCGGTACAGCTCCAGGCA 42450 || || || |||||||||||||| |||| || | || || |||| || ||||| ||||| Sbjct 200 CCGGCGGCACCGAGGTCCTGGATGCCCTCCACGACCTGCGCCGCG-TAGAGCTCGAGGCA 142 Query 42451 GCACTCGATGAGCACCTTCTCGGCGAAGGGGT 42482 |||||||||||| |||||||| |||||||| Sbjct 141 GCACTCGATGAGGACCTTCTCCATGAAGGGGT 110 >seq18065 Length=232 Score = 188 bits (208), Expect = 2e-43 Identities = 181/232 (78%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 44433 GTCTTCGGCGTGTACATGGGGGCCTCGTTCGCTCCGAACCACAAGGGCATGCCGATCATC 44492 ||||||||||| ||||||||||| |||||||| || ||||||||||||||| |||||||| Sbjct 1 GTCTTCGGCGTCTACATGGGGGCGTCGTTCGCCCCCAACCACAAGGGCATGGCGATCATC 60 Query 44493 GCGTCCGATGCCCGCCTCGACTTCTTCACCAAGCAGGTGGGCACCTCCCGCAACATACGC 44552 | |||| | |||||||| | |||||||||| |||||| || ||||| ||| Sbjct 61 CCCGCCGACAGCAAGATCGACTTCCTGTCCAAGCAGGTCCTCACCTCGCGGAACATCCGC 120 Query 44553 GGAGGCTGGTGGGCCACCTGGCTCATGGGCGGGCTGAACTACCAGATCGAGCACCACCTC 44612 || || |||||| | | |||||||||||||| |||| |||||||||||||||||| Sbjct 121 GGCGGGTGGTGGATGAACATCCTCATGGGCGGGCTCAACTTCCAGATCGAGCACCACCTG 180 Query 44613 TTCCCCAGCATGCCTCGGATCCATCTGTCCCAGGCAAGGAAGATCGTGCGCG 44664 ||||| |||||||| || || || | | ||| | |||||||||||| Sbjct 181 TTCCCGAGCATGCCGCGCCCGCACCTCGCGCGGGCCCGCGAGATCGTGCGCG 232 >seq8964 Length=150 Score = 176 bits (194), Expect = 1e-39 Identities = 129/150 (86%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 42796 GTCGTCGGCCGCGCCGAAGCGCAGGGCGTCCATGACCGCGACCGGGCGAGCGCCCATGGA 42855 || |||| | ||||||||||| || ||||||||| ||||| ||||| ||||||||||| Sbjct 150 GTGGTCGACGGCGCCGAAGCGGAGCTGGTCCATGACGGCGACGGGGCGCGCGCCCATGGA 91 Query 42856 GATGATGTCGCGGACGATGCCGCCCACACCCGTCGCCGCGCCCTGGAAGGGCTCGATGAA 42915 |||||||||||| ||||||||||| ||||||||||| ||||||||| ||||||||| ||| Sbjct 90 GATGATGTCGCGCACGATGCCGCCGACACCCGTCGCGGCGCCCTGGTAGGGCTCGACGAA 31 Query 42916 CGAGGGGTGGTTGTGACTCTCCGCCTTGAA 42945 ||| ||||||||||| ||| ||||||| Sbjct 30 CGACGGGTGGTTGTGCGACTCGACCTTGAA 1 >seq20451 Length=282 Score = 174 bits (192), Expect = 5e-39 Identities = 201/271 (74%), Gaps = 0/271 (0%) Strand=Plus/Minus Query 42946 CGTGACCGCCCATCCCTCGCCGACGTCGATGACGCCCGCGTTCTGCCCCATCCCGACCAT 43005 ||| || ||||| || || |||| ||||| |||||||||||||| || || ||||| | Sbjct 282 CGTCACGGCCCAGCCGTCACCGATGTCGACGACGCCCGCGTTCTCGCCGATGCCGACGAG 223 Query 43006 GAGGCGCTCGCGCATCTCGTCCGAGACCTTCTGCCCGAACCTCTTGAGGTAGAGCTTGCT 43065 ||| ||| ||||||||||| | | | |||||| || |||| || |||| Sbjct 222 CAGGTGCTTCTTCATCTCGTCCGTGGTCGCCGCGCCGAACTTCGACAGGTGGACCTTGGA 163 Query 43066 CGACTTGTAGGAGCAGTGCTCCGACCACATCACCGAGTACATCGCCAGCTCGCCCGAGGT 43125 ||||||||| ||||||||||| |||||||| || ||||||||||| ||||| | | || Sbjct 162 CGACTTGTACGAGCAGTGCTCGGACCACATGACGGAGTACATCGCGAGCTCCGCGGCCGT 103 Query 43126 GGGGCGGCGGCCGAGGATCTCCTTGATCCTCGCGTACTCGTCGTCCTTGAGGCCCAGCGC 43185 ||||||||| || ||||| || ||| | | ||||||||| ||||||||| ||| | Sbjct 102 GGGGCGGCGCCCCAGGATGTCGCGGATGCGCTGGTACTCGTCTGGCTTGAGGCCGAGCTC 43 Query 43186 CGCGTAGGGCTGCTCCTTCTCCGGAGTCGCG 43216 ||| | ||||| ||| || || || ||| Sbjct 42 GGCGAACGGCTGGACCTCGTCGGGCGTGGCG 12 >seq24856 Length=168 Score = 131 bits (144), Expect = 5e-26 Identities = 133/167 (80%), Gaps = 6/167 (4%) Strand=Plus/Plus Query 11036 GGGAACCTCACTGCAGACCCTGAGCTGCGTTACACGCAGAACGGGCTGC--CGGTGGCGA 11093 ||||||||||| | |||||| |||||||||| ||| | |||| ||| ||||||| | Sbjct 5 GGGAACCTCACCGGAGACCCGGAGCTGCGTTTCAC-CCCCTCGGG-TGCGGCGGTGGCCA 62 Query 11094 ACTTCACCATCGCATCGACGCCGCGCACCTTCGACCGTCAGGCGAACGAGTGGAAGGACG 11153 ||||||| | || || |||||||| ||||||||||| ||| |||||||||||||||||| Sbjct 63 ACTTCACGGTGGCGTCCACGCCGCGGACCTTCGACCGCCAGTCGAACGAGTGGAAGGACG 122 Query 11154 GCGAAGCGCTGTTCCTCCG-TGCGTCCGTGTGGCGCGAGTTCGCGGA 11199 | || | |||||| | || ||| || | ||||||||| |||||| Sbjct 123 GGGACACCCTGTTCATGCGCTGC-TCGATCTGGCGCGAGGCCGCGGA 168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148202392870852