Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177945.1_202017-04- 26] 24,998 sequences; 12,874,792 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq9730 109 3e-19 seq22341 96.9 2e-15 >seq9730 Length=231 Score = 109 bits (120), Expect = 3e-19 Identities = 137/187 (73%), Gaps = 6/187 (3%) Strand=Plus/Plus Query 66212 CATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACAT 66271 ||||||||| | ||||| || |||||||| ||||| ||||||| |||| || || || Sbjct 45 CATCATCGTCATCGACTCCGTCGCGGCCCTCGTGCCCAAGGCGGAGATCGAGGGCGAGAT 104 Query 66272 CGGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGAC 66331 || ||| |||||||| || || |||||||| ||||| ||||| |||||||| | || Sbjct 105 GGGCGACAGCCACGTCGGTCTCCAGGCCCGCCTCATGTCGCAGGCGCTGCGCAAGATCAC 164 Query 66332 CGGCACGATTGCCAGCAC---CAACACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGAA 66388 ||| || | |||| | | |||| | || | | | || ||||| |||||||| Sbjct 165 CGGTGCGCT---CAGCGCGTCCGGCACGACCGCCATCTTCATCAACCAGCTCCGCGAGAA 221 Query 66389 GATCGGC 66395 ||||||| Sbjct 222 GATCGGC 228 >seq22341 Length=197 Score = 96.9 bits (106), Expect = 2e-15 Identities = 118/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 65964 CCGAGGGGCCGGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGC 66023 ||| | || || || | ||| | ||||| || ||||| || || ||| | || || Sbjct 193 CCGCGCGGGCGCGTCATCGAGGTGTACGGCCCGGAGTCCTCCGGAAAGACGACCGTGGCG 134 Query 66024 CTCCACGCGGTGGCCAATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAA 66083 |||||||| ||||||| |||||| ||||| |||| ||| || | |||||||||||| Sbjct 133 CTCCACGCCGTGGCCAGCGCCCAGCGCGCCGGCGGCATCGCGGCGTTCATCGACGCCGAG 74 Query 66084 CATTCTCTCGACCCTGAGTACGCCGCGGCGCTCGGGGTGGA 66124 || | |||||||| ||||||||| | |||||| || || Sbjct 73 CACGCACTCGACCCGGAGTACGCCAAGAAGCTCGGCGTCGA 33 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242396528210216