Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177945.1_202017-04- 26] 24,998 sequences; 12,874,792 total letters Query= NC_011273.1 Length=164602 Score E Sequences producing significant alignments: (Bits) Value seq10739 338 7e-88 seq18974 235 6e-57 seq23308 190 2e-43 seq22324 145 8e-30 >seq10739 Length=312 Score = 338 bits (374), Expect = 7e-88 Identities = 255/300 (85%), Gaps = 0/300 (0%) Strand=Plus/Plus Query 155998 AACTTCTGGCTGCCGGAGAAGATCCCGGTGTCCAATGACGTCCAGTCGTGGCACCAGCTG 156057 |||||||||||||| ||||| | |||||||| || ||| ||||||||||| || ||| Sbjct 8 AACTTCTGGCTGCCCGAGAAAGTGCCGGTGTCGAACGACATCCAGTCGTGGAACACGCTC 67 Query 156058 ACCGAGGAAGAGCGCCTGATCACCATGCGGGTGTTCACCGGCCTGACGATGCTGGACACC 156117 |||| | | |||| | |||| ||||| || ||||||||||||||| |||||||||| Sbjct 68 ACCGCGCAGGAGCAGGAGCTCACGATGCGCGTATTCACCGGCCTGACGCTGCTGGACACG 127 Query 156118 ATCCAGGGCACCGTCGGCGCGGTCTCGCTCATCCCGGACGCCATCACCCCGCACGAGGAG 156177 ||||||||||| ||||||||||| ||||||||||| ||||| ||||| ||||||||||| Sbjct 128 ATCCAGGGCACGGTCGGCGCGGTGTCGCTCATCCCCGACGCGATCACGCCGCACGAGGAA 187 Query 156178 GCGGTGTACACCAACATCGCGTTCATGGAGAGCGTGCACGCACGCAGCTACTCGAACATC 156237 |||||||||||||||||||||||||||||| |||||||| ||||||||| ||| Sbjct 188 GCGGTGTACACCAACATCGCGTTCATGGAGTCGGTGCACGCCAAGAGCTACTCGTCGATC 247 Query 156238 TTCTCGACGCTGTGCTCCACCAAGGAGATCGACGCCGCGTTCCGCTGGTCGGAGGAGAAC 156297 |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct 248 TTCTCGACGCTGTGCTCCACTCGTGAGATCGACGACGCGTTCCGCTGGTCGGAGGAGAAC 307 >seq18974 Length=223 Score = 235 bits (260), Expect = 6e-57 Identities = 165/188 (88%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 156353 CGCTCAAGCGCAAGGTCGCCTCCACGCTGCTGGAGGGCTTCCTGTTCTACAGCGGCTTCT 156412 ||||||||||||||||||| ||||||||| ||| ||||| |||||| |||||||| Sbjct 1 CGCTCAAGCGCAAGGTCGCGAGCACGCTGCTCGAGTCATTCCTCTTCTACTCCGGCTTCT 60 Query 156413 ACCTGCCGATGTTCTGGTCGTCGCGAGGCAAGCTCACCAACACCGCCGACATGATCCGGC 156472 |||||||||||| |||||||||||| | |||||| || ||||| |||||| | ||||| | Sbjct 61 ACCTGCCGATGTACTGGTCGTCGCGCGCCAAGCTGACGAACACGGCCGACCTCATCCGCC 120 Query 156473 TCATCATCCGGGACGAGGCCGTGCACGGCTACTACATCGGCTACAAGTTCCAGAAGGGCC 156532 |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct 121 TCATCATCCGCGACGAGGCCGTGCACGGGTACTACATCGGCTACAAGTTCCAGAAGGGTC 180 Query 156533 TGGAGAAG 156540 | |||||| Sbjct 181 TCGAGAAG 188 >seq23308 Length=197 Score = 190 bits (210), Expect = 2e-43 Identities = 138/160 (86%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 153078 GAGATCATCGGCCACGGCCAGCAGGCACCCACCGGGCACATCCCGTTCACCGACCGCTCC 153137 |||||||||||| | ||||||||||| || | |||||||||||||||||| ||| || Sbjct 38 GAGATCATCGGCGAGGGCCAGCAGGCCCCGAGCGGGCACATCCCGTTCACGCCGCGCGCC 97 Query 153138 AAGCGCGTCCTGGAGCTGTCGCTGCGCGAGGCGCTGCAGCTCGGCCACAACTACATCGGC 153197 ||| || || ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 98 AAGAAGGTGCTCGAGCTGTCGCTGCGCGAGGCGCTCCAGCTCGGCCACAACTACATCGGC 157 Query 153198 ACCGAGCATCTCCTGCTGGCCCTGATCCGCGAGGGTGAGG 153237 |||||||| ||||||| | ||| ||||||||||| |||| Sbjct 158 ACCGAGCACATCCTGCTCGGCCTCATCCGCGAGGGCGAGG 197 >seq22324 Length=160 Score = 145 bits (160), Expect = 8e-30 Identities = 128/158 (81%), Gaps = 4/158 (3%) Strand=Plus/Plus Query 156617 AGTACACCCAGGACCTCTACGACGCCACCGGCCAGACCGAGGACGTGAAGAAGTTCCTGC 156676 ||||||| ||||||||||||||| | ||| | |||||||||||| ||||||||||||| Sbjct 5 AGTACACGGAGGACCTCTACGACGGCGTCGGGCTGACCGAGGACGTCAAGAAGTTCCTGC 64 Query 156677 GGTACAACGGCAACAAGGCCCTGCAGAACCTGGGCTACGACGCGCTGTTCAGCCGCAG-- 156734 ||||||||| ||||||||| || |||||| |||||||| ||||| ||| || || Sbjct 65 GGTACAACGCCAACAAGGCGCTCATGAACCTCGGCTACGAGGCGCTCTTC--CCCAAGGA 122 Query 156735 CGACTGCGACGTCAACCCGGCCATCCTGAGCGCGCTGT 156772 ||| ||||||||||||||| ||||| ||||||| Sbjct 123 CGAGACCGACGTCAACCCGGCGATCCTCTCGGCGCTGT 160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 526433851164960