Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177945.1_202017-04-
26] 24,998 sequences; 12,874,792 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq6575 228 9e-55
seq2102 210 2e-49
seq9359 154 2e-32
>seq6575
Length=2957
Score = 228 bits (252), Expect = 9e-55
Identities = 1116/1763 (63%), Gaps = 60/1763 (3%)
Strand=Plus/Minus
Query 47013 GTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTA 47072
|||| ||| || ||||||||||| |||||||| |||| || |||||||||||||||
Sbjct 2512 GTTCTTAAGTAGTACATACCAGTTTTTAAACCCTTCTTCCAACCGTAGAAATGCATACTA 2453
Query 47073 GTTAATTTAGA-ATAACTAGGTTCT-GAAATATGAATATTAAGAGATTGACTCTGATCAA 47130
|| | ||| || | ||| || | || | || ||| | || ||| |||||| |
Sbjct 2452 GTAATCTTACCCATTGAT-GGTGCTTGCAAGAA-AAGATTCAAGGAATGAGACTGATCGA 2395
Query 47131 T--AAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATAC 47188
| | ||| | | |||||| ||||||| | ||| | |||| | || ||||| ||
Sbjct 2394 TGTAGATGG--CACGATCAGCAGCCATATTGATAATGGTCTTTTGAGAGATTTCCCAGAC 2337
Query 47189 TGTTTTATA-AATTTGTTTAATGTCTTCTGGGAGATTAG-TATT--TTGAATAGATCCTC 47244
||||| || |||| || ||| |||| ||| | ||| | || ||||||||| ||
Sbjct 2336 GGTTTTGTATAATTCCTTCAAT-TCTTGTGGCACATTTGGTAAGCCTTGAATAGAACCA- 2279
Query 47245 Cgttttctataatt-----ttgttttttaat-tcatttgaccaaagttttcgttc-agtt 47297
|||| | ||||| |||||| || | |||| ||||| | || | |
Sbjct 2278 --TTTTGTGTAATTAGATATTGTTTCATACTATCATC---CCAAATACCCAGGTCGACTA 2224
Query 47298 aat---gtttttaaAAGATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGG 47354
||| || | ||| ||| ||||||||| ||| ||||| ||||| || || | |||
Sbjct 2223 AATCACGTAGT--AAATATG--GATTAACAACTTGGAATTCACCAGACAGGACACGACGA 2168
Query 47355 CTATATATATTACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTT 47414
|| || || || |||||| | ||||||||| |||| |||||| | ||||
Sbjct 2167 GAGTACATGTTTGAGGTCACTGGTTCGAAGCATTCATTATAACCAAGAATTTGGGAAGTT 2108
Query 47415 GATGCTGTAGGCATGGATGCAACTAATAAGCTA-TTTCTTACTCCATATTTTTGTATCTN 47473
|| || || ||||| | ||| | || | | | ||||||| |||| ||| || |
Sbjct 2107 GAGGCGGTTGGCATTGGTGCCA-TAGTCAAAGAGTTTCTTAACCCATGTTTAACAATGTC 2049
Query 47474 NNNNNNNNNNNGTTTCCAATCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTG 47533
|| ||||||||| | | |||| | | ||||| | ||| ||||
Sbjct 2048 CTTTCTTAAGGTTTCCCAATCCCACATGCCAAATGGTTTAGCGTTCCACATATCGAATTG 1989
Query 47534 AAGAATTCCTTTACTTATCGGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGC 47593
| ||| || ||| |||||||| | | | || ||| ||| | | || ||
Sbjct 1988 TAAAATACCCTTAGAAGCTGGAGAACCTTCAAAAGTAGAATATTTACCTTCTTTTTGGGC 1929
Query 47594 GAGTTCACAACTTGCTTCCAATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAG 47653
| |||||| ||||| | | | || || || ||||| || |||| | |||||||
Sbjct 1928 CAATTCACAGGAGGCTTCAAGAGTAGCATGGTAAATAGTTTCGAAGATTTGTTTGTTTAG 1869
Query 47654 ATTCCTTGCTTCTGATGATTCAAAAGGATANNNNNNNNNNNNNA-ATGTATCTGCCAATC 47712
| | |||||| |||||||| || || | | ||||| ||||| |
Sbjct 1868 AGTTTGAGCTTCTTCCGATTCAAAGGG-TAGACGCAACATCATATAAGTATCGGCCAAAC 1810
Query 47713 CTTGAACACCAATACCAATTGGTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATG 47772
| || ||||||| | |||| |||||||| | |||| ||| ||| || || | ||
Sbjct 1809 CCTGGACACCAAGAGCAATAGGTCTATGCTTCATATTTGAATTTCTAGCCTCGGGAACTG 1750
Query 47773 GATATTTGTTTATATCTATAATTTTATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTC 47832
|||| | || || |||| | | || | |||| ||
Sbjct 1749 GATAGTAATTACGGTCGATAACTCTGTTCAAGTTGTGAGTAATGACTTTAGCAATCTCGT 1690
Query 47833 TTAATTTATTAAAATCAAA-CTTGTTATTTATAACA--------AACCT------ATTA- 47876
|||| | | |||| | | |||| ||| || || ||||| ||
Sbjct 1689 GTAATCTCTCGAAATTATAGCTTGCAGTTT-TACCATCTTCTGAAACCTCAACGAATGCT 1631
Query 47877 ---AGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATT 47933
|| || ||||| |||| |||||| || || |||| || | ||||| |
Sbjct 1630 GGTAGGGCAATAGAAGCTAAATTACAAACTGCAGTTTCATCCGGGGAGGAATATTCGACG 1571
Query 47934 ATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTG 47993
|||||| ||||| ||| ||||||||||||| || || || || || | ||
Sbjct 1570 ATTTCACAACATAAGTTAGATGATTTGATAGTACCTAAGTTCTGTTGGTTTGTCTTCCTG 1511
Query 47994 TTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATA 48053
|||||||||||||| |||| ||| |||||||| || |||||| |||| | || | ||
Sbjct 1510 TTACATGCGTCCTTATAAACCATGAAAGGTGTACCTGTTTCTGTCTGTGCTTGCAAAATG 1451
Query 48054 GATTTCCAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTATTTA 48113
| | ||| | | | | | ||||| | | | || | | || |||||| |
Sbjct 1450 GCATACCACA-ACTTTTGGGCTTTA--ATTGTTTTACCACGACCTTCTCTTTCGTAACGA 1394
Query 48114 GTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGA 48173
||||||| | ||||||||||| || |||||| |||||| || || || | ||
Sbjct 1393 GTATATAGTTCTTCAAATTCATCACCCCACACATCATCTAAACCTGGGGCAGCACTGGGC 1334
Query 48174 CACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAA 48233
| | ||| | |||| | |||| | || || | |||| || | ||| || |||||
Sbjct 1333 GAAAACAAAGTCCAAGGCCCATCCTCTTGAACACGTTTCATGAAAAGATCAGGGATCCAT 1274
Query 48234 AGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCA 48293
||||| || ||||| || | | | |||||| || ||| | || | | ||
Sbjct 1273 AGAGCAGGGAACAAATCTCTTGCACGAATTTCTTCCTTACCATGTGTTTTTCTGATATCG 1214
Query 48294 AGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGT 48353
| |||||| | ||||| ||||||||||| || || | | || | |||| ||||
Sbjct 1213 ACAAAGTCGAAGATATCTGCATGCCATGGCTCCAAGAAAAGGGCGAAAGCACCAGGTCTC 1154
Query 48354 TTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACA 48413
|| ||||| || || || | ||| | ||||||||| || |||| | | ||| || |
Sbjct 1153 TTGTTACCACCCTGGTCCACATAACGGGCAGTATTATTGAAAACACGAATCATAGGAATC 1094
Query 48414 ATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTA 48473
| || ||||| |||| ||||| || | |||||| || | | | || || |
Sbjct 1093 AACCCGTTTGAAGTACCGTTGGTACCAGCGATATAAGAACCTGTGGAACGGATGTTGTTG 1034
Query 48474 ATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCA 48533
|| || ||| | ||||||||| |||| || || | |||||| ||| | ||||||
Sbjct 1033 ATATGAAGACCAACACCACCTGCAGTTTTGGAAATCATAGCACATTCTTTCAAAGTATCA 974
Query 48534 TAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGA 48593
||||| ||||| ||| ||||| |||| | || ||||| ||||||||| |||
Sbjct 973 TAAATACCTTCGATAGAGTCATCCTTCATGGCAATTAAGAAACATGAAGACATTTGAGGA 914
Query 48594 TGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAAC 48653
|| || || | || ||||| ||||| || || ||| | || || | || | |
Sbjct 913 TGTGGCGTACCAGCGTTGAATAAAGTTGGGGAAGCGTGAGTGAAGTATCTTAACGACATC 854
Query 48654 AATTTATATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATACACGC 48713
|| ||||| || | | ||||| || ||||| | ||| ||||||| | ||||||
Sbjct 853 AAATTATAAGTCTTCAGCACAGATTCGATATCGCTACCATGGATACCTAGCGCCACACGC 794
Query 48714 ATTAACATATATTGAGGTCTTTC 48736
|||| || || ||||| | |||
Sbjct 793 ATTACCAAATGCTGAGGACGTTC 771
>seq2102
Length=1470
Score = 210 bits (232), Expect = 2e-49
Identities = 431/632 (68%), Gaps = 13/632 (2%)
Strand=Plus/Minus
Query 18952 AACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAA 19011
|||| ||| |||||||| || || | || |||||||||| |||||||| || |||
Sbjct 1437 AACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAA 1378
Query 19012 AATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCA 19071
|| |||||||| ||||||| ||||| ||||| |||||||| || || ||||| || ||
Sbjct 1377 AAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCG 1318
Query 19072 GAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTA-GCATC 19130
|| || || | |||||| | | ||||| |||||||||||||| ||| ||| | || ||
Sbjct 1317 GAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCA-AACAAGGCGTC 1259
Query 19131 ATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTC 19190
| | ||||||||| | | ||||| || ||||||| | ||| || || |
Sbjct 1258 AGCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATGGTGTG 1199
Query 19191 TATAGAATTAAATAGATACATACGCTCATCTGTA---TCTTTAACATATGCATCTATCAA 19247
|| | ||| || | | | || | || ||| || || || | || | ||| |||||
Sbjct 1198 AATGGCATTGAACA-AGA-ATTCACT-TTCTTTAGGGTCCTTGATGTAAGTATCGATCAA 1142
Query 19248 TAAACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCT 19307
|| ||| |||| || ||||||||||| || || || || ||||| |||| |
Sbjct 1141 CAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTT 1082
Query 19308 TGCTTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCC 19367
||| |||| || || ||||| | | || |||| ||||| ||||||||||| || ||
Sbjct 1081 TGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACC 1022
Query 19368 ATCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAA 19427
||| ||| || ||||| || | || ||| ||| | | || | | ||| |
Sbjct 1021 GTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGT-TCTCGTTCA 963
Query 19428 T----GTATTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAG 19483
| | ||||| |||| ||||| ||||| ||||| | ||||||| | ||||| ||||
Sbjct 962 TTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAG 903
Query 19484 AAGCCTCTGCTTTTTTATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAA 19543
|||| || || || || | ||| || ||| | || | ||||| || | ||||
Sbjct 902 AAGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCATGGTACTTGATAGGGAAAAGAACAG 843
Query 19544 ATCTATTTTTATTTTCTTTAAGAATAGGTTCC 19575
||| | || | ||| || | | |||||||
Sbjct 842 TTCTCTCCTTGTCTTCATTCAACAAAGGTTCC 811
>seq9359
Length=3639
Score = 154 bits (170), Expect = 2e-32
Identities = 573/892 (64%), Gaps = 7/892 (1%)
Strand=Plus/Minus
Query 47958 TTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATA 48017
||||| ||| || |||| |||||| ||||||| || |||||||||| |
Sbjct 2218 TTGATGACACCTAAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGTAAACAACG 2159
Query 48018 AAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCCTAGCCTTT 48077
|||||||| |||||||| | |||| ||| | || || | ||| | | | | | ||||
Sbjct 2158 AAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAAATGGAATACCATA-ATTTTTGGGCTTT 2100
Query 48078 ATAACAGCTCTAGCTTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCC 48137
| || || | | || | ||||| ||||||| |||||| || ||
Sbjct 2099 G--ATAGTCTTACCACGACCTTCTTTCTCGTAGCGGGTATATAGAGCCTCAAACTCGTCA 2042
Query 48138 CCATACACATTATCT-AACCCAGGACATTCATTAGGACACATCAATGACCAATCCTCATC 48196
|| || ||| | || || |||||| | | ||| | | |||| ||| | |||
Sbjct 2041 CCGTA-ACAATCGCTTAAACCAGGAGCTGATGTTGGAGAGAATAATGTCCAGGTCCCATT 1983
Query 48197 ATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGT 48256
| || || | |||| || | ||| || ||||| ||||| || ||||| || |
Sbjct 1982 TTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGC 1923
Query 48257 TCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATG 48316
| | ||| || || || ||| | ||| |||| ||| || | ||||||||||||
Sbjct 1922 ACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAATATATCAGCATG 1863
Query 48317 CCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATA 48376
||||||||| | || | || | |||| |||| ||||||||| || || || | |||
Sbjct 1862 CCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAACATA 1803
Query 48377 TCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGT 48436
| ||| || || || |||| | | ||| || | | ||| || || |||| || ||
Sbjct 1802 ACGGGCGGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGT 1743
Query 48437 TCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAAATACCTATACCACCTGC 48496
|| | ||| ||| ||| | | | || ||| || | ||| |||||||| ||
Sbjct 1742 ACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGC 1683
Query 48497 CATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATC 48556
|||| || || | |||||| || | ||| || ||||| || || ||| || ||
Sbjct 1682 AGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTC 1623
Query 48557 TATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAA 48616
|||| | | |||||| |||||||| || | ||| || | ||| || ||
Sbjct 1622 CTTCATGGCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAA 1563
Query 48617 TGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGA 48676
|||||||| || ||| |||| |||| || | ||| ||||| ||||| | | |||
Sbjct 1562 CGTTGGAGAGGCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGC 1503
Query 48677 ATCTATATCCCATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTC 48736
|| ||||| | || || |||| | || | ||| | | || ||| || | |||
Sbjct 1502 CTCGATATCTCTACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGACGTTC 1443
Query 48737 AACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATA 48796
| | || || ||| | | | ||| || |||||| |||||||||||||||||
Sbjct 1442 GGCCACTTGACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAAAATA 1383
Query 48797 GTTGTA-TGAAAAGTCGTTATCATTAATAATTGATGAATTTATTCTTTCCTT 48847
|||| |||||| || | |||| | ||||| || || | | | |||||
Sbjct 1382 ACTGTACTGAAAA-TCTCTGTCATAGACAATTGCGGAGTTCAATTTATCCTT 1332
Score = 86.0 bits (94), Expect = 7e-12
Identities = 203/301 (67%), Gaps = 7/301 (2%)
Strand=Plus/Minus
Query 48897 TAAAGATCTTCTACAACATCACTAAATAttttttttGTTTCTTTATGAAGATTAGATATA 48956
||||||||||| ||||| | | |||| |||| | |||| |||||| | |||||| ||
Sbjct 1165 TAAAGATCTTCGACAACCTTAGAAAATTGTTTTGTGGTTTGTTTATGTAAATTAGAAATG 1106
Query 48957 GATATTCTAGCAGCTAATATAGCATAATCTGGATGAATTGTTGTACATGTACTAG-ATAT 49015
| ||||| || |||| | || ||||||||||||| || || ||| || | || |
Sbjct 1105 GCAATTCTGGCCGCTAGGGTGGCGTAATCTGGATGAACAGTAGT-CATATAAGCGCATGT 1047
Query 49016 TTCTGCTGCTAATATATCTAATTCTTTAGTAGTTACACCTGTATATATTCCTTGAATAAC 49075
||| || ||||| | |||| ||| | || || |||||| ||| | || ||| |
Sbjct 1046 TTCAGCGGCTAAGTTGTCTAGTTCGATTGTTGTGACACCTTCATAGACACCAGAAATGA- 988
Query 49076 TTTCATT--GCTATATTTACTGGATCTATATGATCCATATCCAGTCCATAACATAAtttt 49133
| | || | | || || | || ||||| | ||| | ||||| ||||| |
Sbjct 987 -TACGTTGGGTGACCTTAACGGCGTCGATATGTTTTGGATCTAAACCATAGCATAAGCGT 929
Query 49134 tttATTCTAGATGTAATTTTATCAAACATTATATTCTCTTTACGACCGTCACGTTTTATA 49193
||| | || ||||| ||||| || | | |||||||||||||| | |||||||
Sbjct 928 GATATACGAGCGGTAATCTTATCGAATTGGACAGGTTCTTTACGACCGTCTC-TTTTATA 870
Query 49194 A 49194
|
Sbjct 869 A 869
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 561933155052720
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