Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177945.1_202017-04- 26] 24,998 sequences; 12,874,792 total letters Query= NC_021298.1 Length=51252 Score E Sequences producing significant alignments: (Bits) Value seq11981 199 1e-46 seq18795 150 6e-32 seq7075 93.3 1e-14 >seq11981 Length=303 Score = 199 bits (220), Expect = 1e-46 Identities = 226/303 (75%), Gaps = 0/303 (0%) Strand=Plus/Plus Query 40265 GTACCGAGGGTGCTCGGCGTTGAAGATCCCGTCGAGGGGCATCGAGTTGCCCATCACGTC 40324 |||||| ||||| || || ||||||||| ||||| || |||||||||||| | Sbjct 1 GTACCGCTCGTGCTTGGGGTCGAAGATCCCCGACAGGGGGATGTCCTTGCCCATCACGGC 60 Query 40325 GGCCGGGTACGCCTTGGTCAGCTTCTCGCCGACCTGGAAGGGCTTGTCCAGCACGCGGGC 40384 | ||| ||||||||| |||||||| || | | |||||| | | || | || || Sbjct 61 CGGCGGCATCGCCTTGGTGAGCTTCTCCCCCATCGCGAAGGGGAAGCCGAGGAGCCGCGC 120 Query 40385 TGCGTCCTTCATCGCGTTGCGCGCCTTGATCCGTCCGTACGTCGCGATCTGCGCGACCTT 40444 | |||||| | ||| | |||||||| ||||| || ||||||| ||||| Sbjct 121 CGAGTCCTTGAGCGCCTGCTTGGCCTTGATGGTGCCGTAGGTGACGATCTGGGCGACGCG 180 Query 40445 GTCGGCCCCGTACTTCCGGGTGACGTACTGGATCACCTCGCCACGACGCCGGTCATCGAA 40504 |||| | ||||||||| ||||||||| |||| ||||| || || || || || ||||| Sbjct 181 GTCGTCGCCGTACTTCTCCGTGACGTACCGGATGACCTCCCCGCGCCGACGCTCGTCGAA 240 Query 40505 GTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATGAG 40564 ||||| |||||| |||||||| ||||| ||||||||||| ||||||||||||||||| || Sbjct 241 GTCGACGTCGACGTCGGGCATCGACACACGCTCGGGGTTGAGGAACCGCTCGAAGATCAG 300 Query 40565 TCC 40567 || Sbjct 301 CCC 303 >seq18795 Length=169 Score = 150 bits (166), Expect = 6e-32 Identities = 119/143 (83%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 39351 GCCGCCATGTACTCGGCTGGGTAGTGCGTCTTCAGCCACGCCGTGCGGTACGCGATGAGT 39410 |||||||||||||| | ||||||| || ||| || ||||||| | |||||| | ||| Sbjct 143 GCCGCCATGTACTCCGTCGGGTAGTTCGCCTTGAGGAACGCCGTCCAGTACGCCACGAGG 84 Query 39411 CCGTACGCCGCCGAGTGCGCCTTGTTGAAGGCGTAGCCAGCGAACGGGACCAGCACGTCC 39470 |||||| | || |||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct 83 CCGTACCCGGCGGAGTGCGCCTTGTTGAAGGCGTAGCCCGCGAACGGGACCAGCGTGTCC 24 Query 39471 CACACTGCCTGGATGGCACCGTC 39493 || || |||||||| || |||| Sbjct 23 CAGACCGCCTGGATCGCGGCGTC 1 >seq7075 Length=343 Score = 93.3 bits (102), Expect = 1e-14 Identities = 202/300 (67%), Gaps = 2/300 (1%) Strand=Plus/Minus Query 41091 ACGTAGTGGGAATCGTTCGTGACCACCGGAGTGAGCGC-GAGGTGCTTCCCGAGCCGGTA 41149 ||||||||| |||||||| | || | | | |||| || | || | |||| || Sbjct 302 ACGTAGTGGAGGTCGTTCGTCGCGACGAG-GCGCGCGCCGATGGTCTCCGCGAGGCGCAG 244 Query 41150 CAGATCCTCGCGGACCCGGCGCTCGATCTCGATGCCGTGGTCCATGAGTTCGAGCAGGTA 41209 || |||| |||||| |||||| ||||| |||||||||||||| |||| | | | Sbjct 243 GAGGTCCTTCGTGACCCGCGTCTCGATGTCGATCCCGTGGTCCATGAGCTCGACGAAGAA 184 Query 41210 GCGCTCGCGACCCAGGATCTCCAGCCAGTCGCCAGCGGCCCTGACTGCCTCGTCGTACTG 41269 | |||||| || | ||| ||| | ||||| || | || || |||||||| |||| Sbjct 183 GTTCTCGCGGCCGAAGATGTCCTGGAGCTCGCCCGCCGTCCGCACCGCCTCGTCCCACTG 124 Query 41270 ACCCAGGTTCAGCCTGGTCATGACTTCGCCACCAGGGCACCCCGTGGTTCCGATGATGCC 41329 || ||| ||| | ||| || ||||| |||||||| | || ||| || ||| Sbjct 123 TCCGAGGCGCAGGCGCGTCTGGATCTCGCCCGACGGGCACCCGCTCGTCGCGACGAGGCC 64 Query 41330 CTCGCTGCACTCGGCGACGAGTTCCTTGTCGAGGCGGGCGTACTTGCCCATCAGCCCCTC 41389 || || | || || ||| || ||| | ||| | ||||||||||| ||||||| Sbjct 63 CTTGCCGTACCGCTGGAGGAGGTCGCGGTCCATGCGCGGCCACTTGCCCATCTGCCCCTC 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163836150592264