Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177945.1_202017-04- 26] 24,998 sequences; 12,874,792 total letters Query= NC_021304.1 Length=51552 Score E Sequences producing significant alignments: (Bits) Value seq11981 205 3e-48 seq18795 150 6e-32 seq7075 100 9e-17 >seq11981 Length=303 Score = 205 bits (226), Expect = 3e-48 Identities = 227/303 (75%), Gaps = 0/303 (0%) Strand=Plus/Plus Query 40553 GTACCGAGGGTGCTCGGCGTTGAAGATCCCGTCGAGGGGCATCGAGTTGCCCATCACGTC 40612 |||||| ||||| || || ||||||||| ||||| || |||||||||||| | Sbjct 1 GTACCGCTCGTGCTTGGGGTCGAAGATCCCCGACAGGGGGATGTCCTTGCCCATCACGGC 60 Query 40613 GGCCGGGTACGCCTTGGTCAGCTTCTCGCCGACCTGGAAGGGCTTGTCCAGCACGCGGGC 40672 | ||| ||||||||| |||||||| || | | |||||| | | || | || || Sbjct 61 CGGCGGCATCGCCTTGGTGAGCTTCTCCCCCATCGCGAAGGGGAAGCCGAGGAGCCGCGC 120 Query 40673 TGCGTCCTTCATCGCGTTGCGCGCCTTGATCCGTCCGTACGTCGCGATCTGCGCGACCTT 40732 | |||||| | ||| | |||||||| ||||| || ||||||| ||||| Sbjct 121 CGAGTCCTTGAGCGCCTGCTTGGCCTTGATGGTGCCGTAGGTGACGATCTGGGCGACGCG 180 Query 40733 GTCGGCCCCGTACTTCCGGGTGACGTACTGGATCACCTCGCCACGACGCCGGTCATCGAA 40792 |||| | ||||||||| ||||||||| |||| ||||| || || || || || ||||| Sbjct 181 GTCGTCGCCGTACTTCTCCGTGACGTACCGGATGACCTCCCCGCGCCGACGCTCGTCGAA 240 Query 40793 GTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATGAG 40852 ||||| |||||| |||||||| ||||| ||||||||||| ||||||||||||||||| || Sbjct 241 GTCGACGTCGACGTCGGGCATCGACACACGCTCGGGGTTGAGGAACCGCTCGAAGATCAG 300 Query 40853 CCC 40855 ||| Sbjct 301 CCC 303 >seq18795 Length=169 Score = 150 bits (166), Expect = 6e-32 Identities = 119/143 (83%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 39639 GCCGCCATGTACTCGGCTGGGTAGTGCGTCTTCAGCCACGCCGTGCGGTACGCGATGAGT 39698 |||||||||||||| | ||||||| || ||| || ||||||| | |||||| | ||| Sbjct 143 GCCGCCATGTACTCCGTCGGGTAGTTCGCCTTGAGGAACGCCGTCCAGTACGCCACGAGG 84 Query 39699 CCGTACGCCGCCGAGTGCGCCTTGTTGAAGGCGTAGCCAGCGAACGGGACCAGCACGTCC 39758 |||||| | || |||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct 83 CCGTACCCGGCGGAGTGCGCCTTGTTGAAGGCGTAGCCCGCGAACGGGACCAGCGTGTCC 24 Query 39759 CACACTGCCTGGATGGCACCGTC 39781 || || |||||||| || |||| Sbjct 23 CAGACCGCCTGGATCGCGGCGTC 1 >seq7075 Length=343 Score = 100 bits (110), Expect = 9e-17 Identities = 206/301 (68%), Gaps = 4/301 (1%) Strand=Plus/Minus Query 41379 ACGTAGTGGGAATCGTTCGTGACCACCGGAGTGAGCGC-GAGGTGCTTCCCGAGCCGGTA 41437 ||||||||| |||||||| | || | | | |||| || | || | |||| || Sbjct 302 ACGTAGTGGAGGTCGTTCGTCGCGACGAG-GCGCGCGCCGATGGTCTCCGCGAGGCGCAG 244 Query 41438 CAGATCCTCGCGGACCCGGCGCTCGATCTCGATGCCGTGGTCCATCAGCTCCAGGAAGTA 41497 || |||| |||||| |||||| ||||| ||||||||||| ||||| | |||| | Sbjct 243 GAGGTCCTTCGTGACCCGCGTCTCGATGTCGATCCCGTGGTCCATGAGCTCGACGAAGAA 184 Query 41498 CCGGTCACGCCCGAAGACCTCCAGGTAC-CGACCGGCCTCCTTCACGGCCTCGTCGTACT 41556 || || ||||||| ||| || | || ||| | ||| ||| |||||||| ||| Sbjct 183 GTTCTCGCGGCCGAAGATGTCCTGGAGCTCGCCCGCCGTCCG-CACCGCCTCGTCCCACT 125 Query 41557 GCCCGAGGTTCAGCCGGGTCATGATCGCACCGCCAGGACATCCGGTCGTGACGACCAGGC 41616 | |||||| ||| || ||| |||| | || || || ||| |||| |||| |||| Sbjct 124 GTCCGAGGCGCAGGCGCGTCTGGATCTCGCCCGACGGGCACCCGCTCGTCGCGACGAGGC 65 Query 41617 CCTCGTTGTGCTCGGCGACCAGGTCGAAGTCCATGCGCGGGTACTTCCCGAGCAGGCCCT 41676 ||| | || | || |||||| |||||||||||| |||| || | | | |||| Sbjct 64 CCTTGCCGTACCGCTGGAGGAGGTCGCGGTCCATGCGCGGCCACTTGCCCATCTGCCCCT 5 Query 41677 C 41677 | Sbjct 4 C 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164795865615064