Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177945.1_202017-04- 26] 24,998 sequences; 12,874,792 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq9359 178 4e-39 seq6575 147 6e-30 seq6453 131 5e-25 seq2667 102 2e-16 seq17571 84.2 6e-11 >seq9359 Length=3639 Score = 178 bits (196), Expect = 4e-39 Identities = 481/732 (66%), Gaps = 12/732 (2%) Strand=Plus/Minus Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689 |||||| ||||| |||||||| | ||| || ||||||| ||||| || || || || Sbjct 2252 GTATTCAACAATTTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGATT 2193 Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749 |||||| |||||||||||||||||||| | || | | || || || || || | || || Sbjct 2192 AGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGC 2133 Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTG--CCTTCC 155807 |||| ||| ||| | | |||| |||| | || || | ||||| Sbjct 2132 TTCCAAAATGGAATACCATAATTTTTGGGC-----TTTGATAGTCTTACCACGACCTTCT 2078 Query 155808 GACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGG- 155866 ||| || |||| || | | || |||||||||||||| || | ||||| Sbjct 2077 TTCTCGTAGCGGGTATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAACCAGGA 2018 Query 155867 GCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATAC 155926 || | | || | | || | | ||| | ||| | ||||||| ||| || | Sbjct 2017 GCTGATGTTGGAG-AGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAG 1959 Query 155927 ATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATT 155986 |||| ||| | |||| ||| | || ||||| ||||| | ||||| || Sbjct 1958 ATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTT 1899 Query 155987 CTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAA 156046 ||||| | || | || || ||||||| ||| ||| ||||| || | ||||| Sbjct 1898 CTTCCTAATATCAATAAAATCAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAA 1839 Query 156047 ACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACC 156103 |||| || || |||||||| || ||||| || || || |||||||| |||| Sbjct 1838 CGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACGGGCGGTGTTATTGAAAACACG 1779 Query 156104 TAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGA 156163 | ||||||||| | ||| || ||||| || || || || ||| | ||||||| ||| Sbjct 1778 AATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGA 1719 Query 156164 GCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTC 156223 |||| ||||| |||||||| ||||||||||| | ||| ||||| ||| ||||| Sbjct 1718 ACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTC 1659 Query 156224 CTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGA 156283 ||| | || | | |||| || || ||||| || || | ||| | | | | || || Sbjct 1658 CTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGA 1599 Query 156284 ACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATA 156343 | ||||||| ||| || || || ||||| | || || | || ||| ||||||| Sbjct 1598 GGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGAGTAAAATA 1539 Query 156344 CTTATTAGACAT 156355 || |||||| Sbjct 1538 TTTTAGAGACAT 1527 >seq6575 Length=2957 Score = 147 bits (162), Expect = 6e-30 Identities = 240/341 (70%), Gaps = 6/341 (2%) Strand=Plus/Minus Query 156012 ATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCC 156068 ||||| | ||| |||||||| | | || ||| |||| |||||| |||||| Sbjct 1201 ATATCTGCATGCCATGGCTCCAAGAAAAGGGCGAAAGCACCAGGTCTCTTGTTACCACCC 1142 Query 156069 TGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAA 156128 || || ||||| || ||||| |||||||| |||| | ||||||||| | || || ||| Sbjct 1141 TGGTCCACATAACGGGCAGTATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAA 1082 Query 156129 GTGCCATTGGTTCC-GCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCC 156187 || || ||||| || |||| ||| ||||| | || || | || | ||||| || || Sbjct 1081 GTACCGTTGGTACCAGCGA-TATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACC 1023 Query 156188 AATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTC 156247 || |||||||| ||| ||||| ||| ||||| || | ||||| |||||||||| Sbjct 1022 AACACCACCTGCAGTTTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTC 963 Query 156248 AATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCC 156307 ||||| ||||| | ||| | | || | || ||| | |||||| |||| || || Sbjct 962 GATAGAGTCATCCTTCATGGCAATTAAGAAACATGAAGACATTTGAGGATGTGGCGTACC 903 Query 156308 AGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATA-CTTA 156347 ||||||||||| || || | || ||| | || || |||| Sbjct 902 AGCGTTGAATAAAGTTGGGGAAGCGTGAGTGAAGTATCTTA 862 >seq6453 Length=853 Score = 131 bits (144), Expect = 5e-25 Identities = 256/378 (68%), Gaps = 3/378 (1%) Strand=Plus/Minus Query 288849 CCTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGC 288908 ||| ||||| ||||||| | ||||||| || | ||||||| ||| || || | Sbjct 493 CCTGTCAAATCTACCAGGCCTTAATAATGCTTTATCGAGAATATCGGGTCTATTGGTACC 434 Query 288909 TGCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATT 288968 || || ||||||| || | | | | || |||||||| | ||| |||||||| Sbjct 433 AGCTAAAACAACAACGTGGTCAGCTGGAGTGAAACCATCCATTTCTACTAACATTTGATT 374 Query 288969 AAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttttt 289028 || || | || || |||||||| | |||| ||| |||| | || |||| Sbjct 373 TAGCGTGTTCTCTCTCTCATCATTGGCACCTGAAAAATTACCCTTTTGTCTTGCTTTT-- 316 Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088 || | |||||||||||||||||| || | | | || | ||||| ||| ||| || Sbjct 315 -CCTATAGCATCAATTTCGTCAATAAACACAATCGAGGGTGCATTTTCTCTTGCAGTTTT 257 Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148 || || |||||||| | | ||| |||| ||||||| |||||||||||||||| ||| | Sbjct 256 GAACAAATCTCTTACTCTTGCTGCACCAACACCAACAAACATTTCTACAAATTCTGAACC 197 Query 289149 GGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208 || || | || | ||| ||||| |||||| |||| | || || | || || Sbjct 196 AGAAACAAAATAAAACGGAACACCGGCTTCACCTGCTGTTGCCTTTGCAAGCAAAGTTTT 137 Query 289209 ACCTGTTCCAGGTGGTCC 289226 ||| || || ||||| || Sbjct 136 ACCGGTACCTGGTGGACC 119 >seq2667 Length=5389 Score = 102 bits (112), Expect = 2e-16 Identities = 135/184 (73%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598 |||||| ||| |||| ||| || ||| || ||||| | | || | ||||||||| Sbjct 2668 TTTCTTGTGGTGTTATCGTAATGAACCATGATATCTTCTAGAGCTTTCACTAAACGACGT 2609 Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658 ||||||||||| ||| | |||||| || || ||||| || ||||| ||||||||||| Sbjct 2608 TGAATATAACCTGTTTCGGCTGTTTTGACGGCGGTATCGATAAGACCTTCACGACCACCC 2549 Query 302659 ATAGCATGGAAGAATAGCTCT--TCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGA 302716 || |||||||| || | ||| | |||| | || | ||| | | ||| ||||||| | Sbjct 2548 ATTGCATGGAAAAAAAATTCTTGTGGGGTC-AAACCTCTCAA-ATATGAGTTCTCAACAA 2491 Query 302717 AACC 302720 |||| Sbjct 2490 AACC 2487 >seq17571 Length=2668 Score = 84.2 bits (92), Expect = 6e-11 Identities = 110/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 ||||| | |||||||||| ||||||||||| || || || || | || || | Sbjct 2052 TGGGCAACAGTCATACGAGATGGAATAGCATGAGGGTTAATAATCAAATCTGGAACAATA 1993 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTTTG 251957 || || || || || |||||||| || || | ||| || | |||||||| |||||||| Sbjct 1992 CCTTCTGCGGTAAATGGCATATC-TTCTCTACGATATGTGATACCAATAGTACCCTTTTG 1934 Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987 |||||||||||| || || |||||||| Sbjct 1933 ACCGTGACGAGAAGCAAATTTGTCACCAAT 1904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471346196140326