Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177945.1_202017-04- 26] 24,998 sequences; 12,874,792 total letters Query= NC_028827.1 Length=50165 Score E Sequences producing significant alignments: (Bits) Value seq11981 235 2e-57 seq18795 141 3e-29 >seq11981 Length=303 Score = 235 bits (260), Expect = 2e-57 Identities = 234/303 (77%), Gaps = 0/303 (0%) Strand=Plus/Plus Query 39937 GTAGCGCGGGTGCTCCGGGTTGAAGATCCCCTCCAGGGGCATCGACGCGCCCATCACATC 39996 ||| ||| ||||| |||| |||||||||| |||||| || | ||||||||| | Sbjct 1 GTACCGCTCGTGCTTGGGGTCGAAGATCCCCGACAGGGGGATGTCCTTGCCCATCACGGC 60 Query 39997 GGCCGGGTACGCCTTGGTCAGCTTCTCGCCGACCTGGAAGGGCTTGTCCAGCACGCGGGC 40056 | ||| ||||||||| |||||||| || | | |||||| | | || | || || Sbjct 61 CGGCGGCATCGCCTTGGTGAGCTTCTCCCCCATCGCGAAGGGGAAGCCGAGGAGCCGCGC 120 Query 40057 CGCGTCCTTCATCGCGTTGCGCGCCTTGATCCGGCCGAAGGTCCCGATCTGTGCGACCTT 40116 || |||||| | ||| | |||||||| |||| |||| ||||||| ||||| Sbjct 121 CGAGTCCTTGAGCGCCTGCTTGGCCTTGATGGTGCCGTAGGTGACGATCTGGGCGACGCG 180 Query 40117 GTCGGCCCCGTACTTCTCGGTGACGTACCGGATGACCTCGCCGCGACGCCGGTCATCGAA 40176 |||| | ||||||||||| |||||||||||||||||||| ||||| || || || ||||| Sbjct 181 GTCGTCGCCGTACTTCTCCGTGACGTACCGGATGACCTCCCCGCGCCGACGCTCGTCGAA 240 Query 40177 GTCGATGTCAACGTCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATGAG 40236 ||||| ||| ||||||||||| ||||| ||||||||||| ||||||||||||||||| || Sbjct 241 GTCGACGTCGACGTCGGGCATCGACACACGCTCGGGGTTGAGGAACCGCTCGAAGATCAG 300 Query 40237 CCC 40239 ||| Sbjct 301 CCC 303 >seq18795 Length=169 Score = 141 bits (156), Expect = 3e-29 Identities = 132/165 (80%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 38997 TGTCGTCGCCCACCGAGGTG-AGCACGGCCGCCATGTACTCGGCCGGGTAGTGCGTCTTC 39055 ||||||||| ||| | || || | |||||||||||||| | |||||||| || ||| Sbjct 169 TGTCGTCGCGCAC-GCTCTGCAGGAGCGCCGCCATGTACTCCGTCGGGTAGTTCGCCTTG 111 Query 39056 AGGTACGCCGTGCGGTAGGCGATGAGCCCGTACGCCGCAGAGTGCGCCTTGTTGAAGGCG 39115 ||| ||||||| | ||| || | ||| |||||| | || ||||||||||||||||||||| Sbjct 110 AGGAACGCCGTCCAGTACGCCACGAGGCCGTACCCGGCGGAGTGCGCCTTGTTGAAGGCG 51 Query 39116 TACCCGGCGAAGGGTACGAGCACGTCCCACACCGCCTGGATGGCG 39160 || || ||||| || || ||| |||||| ||||||||||| ||| Sbjct 50 TAGCCCGCGAACGGGACCAGCGTGTCCCAGACCGCCTGGATCGCG 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160358783159652