Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177945.1_202017-04-
26] 24,998 sequences; 12,874,792 total letters
Query= NC_028827.1
Length=50165
Score E
Sequences producing significant alignments: (Bits) Value
seq11981 235 2e-57
seq18795 141 3e-29
>seq11981
Length=303
Score = 235 bits (260), Expect = 2e-57
Identities = 234/303 (77%), Gaps = 0/303 (0%)
Strand=Plus/Plus
Query 39937 GTAGCGCGGGTGCTCCGGGTTGAAGATCCCCTCCAGGGGCATCGACGCGCCCATCACATC 39996
||| ||| ||||| |||| |||||||||| |||||| || | ||||||||| |
Sbjct 1 GTACCGCTCGTGCTTGGGGTCGAAGATCCCCGACAGGGGGATGTCCTTGCCCATCACGGC 60
Query 39997 GGCCGGGTACGCCTTGGTCAGCTTCTCGCCGACCTGGAAGGGCTTGTCCAGCACGCGGGC 40056
| ||| ||||||||| |||||||| || | | |||||| | | || | || ||
Sbjct 61 CGGCGGCATCGCCTTGGTGAGCTTCTCCCCCATCGCGAAGGGGAAGCCGAGGAGCCGCGC 120
Query 40057 CGCGTCCTTCATCGCGTTGCGCGCCTTGATCCGGCCGAAGGTCCCGATCTGTGCGACCTT 40116
|| |||||| | ||| | |||||||| |||| |||| ||||||| |||||
Sbjct 121 CGAGTCCTTGAGCGCCTGCTTGGCCTTGATGGTGCCGTAGGTGACGATCTGGGCGACGCG 180
Query 40117 GTCGGCCCCGTACTTCTCGGTGACGTACCGGATGACCTCGCCGCGACGCCGGTCATCGAA 40176
|||| | ||||||||||| |||||||||||||||||||| ||||| || || || |||||
Sbjct 181 GTCGTCGCCGTACTTCTCCGTGACGTACCGGATGACCTCCCCGCGCCGACGCTCGTCGAA 240
Query 40177 GTCGATGTCAACGTCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATGAG 40236
||||| ||| ||||||||||| ||||| ||||||||||| ||||||||||||||||| ||
Sbjct 241 GTCGACGTCGACGTCGGGCATCGACACACGCTCGGGGTTGAGGAACCGCTCGAAGATCAG 300
Query 40237 CCC 40239
|||
Sbjct 301 CCC 303
>seq18795
Length=169
Score = 141 bits (156), Expect = 3e-29
Identities = 132/165 (80%), Gaps = 2/165 (1%)
Strand=Plus/Minus
Query 38997 TGTCGTCGCCCACCGAGGTG-AGCACGGCCGCCATGTACTCGGCCGGGTAGTGCGTCTTC 39055
||||||||| ||| | || || | |||||||||||||| | |||||||| || |||
Sbjct 169 TGTCGTCGCGCAC-GCTCTGCAGGAGCGCCGCCATGTACTCCGTCGGGTAGTTCGCCTTG 111
Query 39056 AGGTACGCCGTGCGGTAGGCGATGAGCCCGTACGCCGCAGAGTGCGCCTTGTTGAAGGCG 39115
||| ||||||| | ||| || | ||| |||||| | || |||||||||||||||||||||
Sbjct 110 AGGAACGCCGTCCAGTACGCCACGAGGCCGTACCCGGCGGAGTGCGCCTTGTTGAAGGCG 51
Query 39116 TACCCGGCGAAGGGTACGAGCACGTCCCACACCGCCTGGATGGCG 39160
|| || ||||| || || ||| |||||| ||||||||||| |||
Sbjct 50 TAGCCCGCGAACGGGACCAGCGTGTCCCAGACCGCCTGGATCGCG 6
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 160358783159652
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |