Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177945.1_202017-04- 26] 24,998 sequences; 12,874,792 total letters Query= NC_028843.1 Length=75816 Score E Sequences producing significant alignments: (Bits) Value seq24856 87.8 9e-13 seq23532 84.2 1e-11 >seq24856 Length=168 Score = 87.8 bits (96), Expect = 9e-13 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 55286 GGCAACCTCACCGCTGATCCGGAACTGAGGTTCTTGGACTCTGGCGTGGCGGTCGCTCAG 55345 || |||||||||| || ||||| ||| | ||| ||| || | |||||| || | Sbjct 5 GGGAACCTCACCGGAGACCCGGAGCTGCGTTTCACCCCCTCGGGTGCGGCGGTGGCCAAC 64 Query 55346 TTCTCGGTGGCGTCTACTCCCCGCAAGTTCAACAAGCAGACGAACGAGTGGGAGGACGGC 55405 ||| |||||||||| || || || | ||| || ||| ||||||||||| ||||||| Sbjct 65 TTCACGGTGGCGTCCACGCCGCGGACCTTCGACCGCCAGTCGAACGAGTGGAAGGACGGG 124 Query 55406 GAAACCGTGTTCCTCCGTACGTCGGTGTGGCGCGAG 55441 || ||| ||||| | || ||| | ||||||||| Sbjct 125 GACACCCTGTTCATGCGCTGCTCGATCTGGCGCGAG 160 >seq23532 Length=158 Score = 84.2 bits (92), Expect = 1e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 63272 GGTTGTAGCGCAGCTTGGTAGCGCGCCTGATTTGGATTCAGGGGGTCGGAGGTTCAAATC 63331 || ||| ||||||||||||||||| ||||| | || ||||||||||| ||||||||||| Sbjct 84 GGCTGTGGCGCAGCTTGGTAGCGCACCTGACTGGGGGTCAGGGGGTCGCAGGTTCAAATC 143 Query 63332 CTTCCAGCCAGACA 63345 || ||||| |||| Sbjct 144 CTGTCAGCCCGACA 157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242412523335606