Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177945.1_202017-04- 26] 24,998 sequences; 12,874,792 total letters Query= NC_028892.1 Length=49949 Score E Sequences producing significant alignments: (Bits) Value seq11981 205 3e-48 seq18795 138 4e-28 >seq11981 Length=303 Score = 205 bits (226), Expect = 3e-48 Identities = 227/303 (75%), Gaps = 0/303 (0%) Strand=Plus/Plus Query 38844 GTAGCGCGGGTGCTCCGGGTTGGTGATGCCCTCCAGGGGCATCGACGCGCCCATCACGTC 38903 ||| ||| ||||| |||| | ||| ||| |||||| || | |||||||||| | Sbjct 1 GTACCGCTCGTGCTTGGGGTCGAAGATCCCCGACAGGGGGATGTCCTTGCCCATCACGGC 60 Query 38904 GGCCGGGTACGCCTTGGTCAGCTTCTCGCCGACCTGGAAGGGCTTGTCCAGCACGCGGGC 38963 | ||| ||||||||| |||||||| || | | |||||| | | || | || || Sbjct 61 CGGCGGCATCGCCTTGGTGAGCTTCTCCCCCATCGCGAAGGGGAAGCCGAGGAGCCGCGC 120 Query 38964 CGCGTCCTTCATCGCGTTGCGCGCCTTGATCCGTCCGTACGTCGCGATCTGTGCGACCTT 39023 || |||||| | ||| | |||||||| ||||| || ||||||| ||||| Sbjct 121 CGAGTCCTTGAGCGCCTGCTTGGCCTTGATGGTGCCGTAGGTGACGATCTGGGCGACGCG 180 Query 39024 GTCACTGCCGTACTTCTCGGTGACGTACCGGATCACGTCGCCACGGCGACGGTCATCGAA 39083 ||| |||||||||||| |||||||||||||| || || || || ||||| || ||||| Sbjct 181 GTCGTCGCCGTACTTCTCCGTGACGTACCGGATGACCTCCCCGCGCCGACGCTCGTCGAA 240 Query 39084 GTCGATGTCCACGTCGGGCATGGAGACACGCTCAGGGTTCAGGAACCGCTCGAAGATGAG 39143 ||||| ||| ||||||||||| || |||||||| ||||| ||||||||||||||||| || Sbjct 241 GTCGACGTCGACGTCGGGCATCGACACACGCTCGGGGTTGAGGAACCGCTCGAAGATCAG 300 Query 39144 CCC 39146 ||| Sbjct 301 CCC 303 >seq18795 Length=169 Score = 138 bits (152), Expect = 4e-28 Identities = 134/170 (79%), Gaps = 2/170 (1%) Strand=Plus/Minus Query 37904 TGTCGTCGCCCACCGAGGTG-AGCACGGCCGCCATGTACTCGGCCGGGTAGTGCGTCTTC 37962 ||||||||| ||| | || || | |||||||||||||| | |||||||| || ||| Sbjct 169 TGTCGTCGCGCAC-GCTCTGCAGGAGCGCCGCCATGTACTCCGTCGGGTAGTTCGCCTTG 111 Query 37963 AGGTACGCCGTGCGGTAGGCGATGAGTCCGTACGCCGCAGAGTGCGCCTTGTTGAAGGCG 38022 ||| ||||||| | ||| || | ||| |||||| | || ||||||||||||||||||||| Sbjct 110 AGGAACGCCGTCCAGTACGCCACGAGGCCGTACCCGGCGGAGTGCGCCTTGTTGAAGGCG 51 Query 38023 TACCCGGCGAAGGGTACGAGCACGTCCCACACCGCCCGGATGGCAGCCTC 38072 || || ||||| || || ||| |||||| |||||| |||| || || || Sbjct 50 TAGCCCGCGAACGGGACCAGCGTGTCCCAGACCGCCTGGATCGCGGCGTC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159667788343236