Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177945.1_202017-04- 26] 24,998 sequences; 12,874,792 total letters Query= NC_028976.1 Length=50113 Score E Sequences producing significant alignments: (Bits) Value seq11981 208 2e-49 seq18795 141 3e-29 >seq11981 Length=303 Score = 208 bits (230), Expect = 2e-49 Identities = 228/303 (75%), Gaps = 0/303 (0%) Strand=Plus/Plus Query 39277 GTAGCGCGGGTGCTCCGGGTTGGTGATGCCCTCCAGGGGCATCGACGCGCCCATCACATC 39336 ||| ||| ||||| |||| | ||| ||| |||||| || | ||||||||| | Sbjct 1 GTACCGCTCGTGCTTGGGGTCGAAGATCCCCGACAGGGGGATGTCCTTGCCCATCACGGC 60 Query 39337 GGCCGGGTACGCCTTGGTCAGCTTCTCGCCGACCTGAAAGGGCTTGTCCAGCACGCGGGC 39396 | ||| ||||||||| |||||||| || | | ||||| | | || | || || Sbjct 61 CGGCGGCATCGCCTTGGTGAGCTTCTCCCCCATCGCGAAGGGGAAGCCGAGGAGCCGCGC 120 Query 39397 CGCGTCCTTCATCGCGTTGCGGGCCTTGATCCTGCCGTACGTCGCGATCTGTGCGACCTT 39456 || |||||| | ||| | ||||||||| ||||||| || ||||||| ||||| Sbjct 121 CGAGTCCTTGAGCGCCTGCTTGGCCTTGATGGTGCCGTAGGTGACGATCTGGGCGACGCG 180 Query 39457 GTCGCTGCCGTACTTCTCGGTGACGTACCGGATCACGTCGCCACGGCGACGGTCATCGAA 39516 |||| |||||||||||| |||||||||||||| || || || || ||||| || ||||| Sbjct 181 GTCGTCGCCGTACTTCTCCGTGACGTACCGGATGACCTCCCCGCGCCGACGCTCGTCGAA 240 Query 39517 GTCGATGTCCACGTCGGGCATGGAGACGCGCTCAGGGTTCAGGAACCGCTCGAAGATGAG 39576 ||||| ||| ||||||||||| || || ||||| ||||| ||||||||||||||||| || Sbjct 241 GTCGACGTCGACGTCGGGCATCGACACACGCTCGGGGTTGAGGAACCGCTCGAAGATCAG 300 Query 39577 CCC 39579 ||| Sbjct 301 CCC 303 >seq18795 Length=169 Score = 141 bits (156), Expect = 3e-29 Identities = 135/170 (79%), Gaps = 2/170 (1%) Strand=Plus/Minus Query 38337 TGTCGTCGCCCACCGAGGTG-AGCACGGCCGCCATGTACTCGGCCGGGTAGTGCGTCTTC 38395 ||||||||| ||| | || || | |||||||||||||| | |||||||| || ||| Sbjct 169 TGTCGTCGCGCAC-GCTCTGCAGGAGCGCCGCCATGTACTCCGTCGGGTAGTTCGCCTTG 111 Query 38396 AGGTACGCCGTGCGGTAGGCGATGAGTCCGTACGCCGCAGAGTGCGCCTTGTTGAAGGCG 38455 ||| ||||||| | ||| || | ||| |||||| | || ||||||||||||||||||||| Sbjct 110 AGGAACGCCGTCCAGTACGCCACGAGGCCGTACCCGGCGGAGTGCGCCTTGTTGAAGGCG 51 Query 38456 TACCCGGCGAAGGGTACGAGCACGTCCCACACCGCCCGGATGGCAGCGTC 38505 || || ||||| || || ||| |||||| |||||| |||| || ||||| Sbjct 50 TAGCCCGCGAACGGGACCAGCGTGTCCCAGACCGCCTGGATCGCGGCGTC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160192432555700