Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177945.1_202017-04-
26] 24,998 sequences; 12,874,792 total letters
Query= NC_028976.1
Length=50113
Score E
Sequences producing significant alignments: (Bits) Value
seq11981 208 2e-49
seq18795 141 3e-29
>seq11981
Length=303
Score = 208 bits (230), Expect = 2e-49
Identities = 228/303 (75%), Gaps = 0/303 (0%)
Strand=Plus/Plus
Query 39277 GTAGCGCGGGTGCTCCGGGTTGGTGATGCCCTCCAGGGGCATCGACGCGCCCATCACATC 39336
||| ||| ||||| |||| | ||| ||| |||||| || | ||||||||| |
Sbjct 1 GTACCGCTCGTGCTTGGGGTCGAAGATCCCCGACAGGGGGATGTCCTTGCCCATCACGGC 60
Query 39337 GGCCGGGTACGCCTTGGTCAGCTTCTCGCCGACCTGAAAGGGCTTGTCCAGCACGCGGGC 39396
| ||| ||||||||| |||||||| || | | ||||| | | || | || ||
Sbjct 61 CGGCGGCATCGCCTTGGTGAGCTTCTCCCCCATCGCGAAGGGGAAGCCGAGGAGCCGCGC 120
Query 39397 CGCGTCCTTCATCGCGTTGCGGGCCTTGATCCTGCCGTACGTCGCGATCTGTGCGACCTT 39456
|| |||||| | ||| | ||||||||| ||||||| || ||||||| |||||
Sbjct 121 CGAGTCCTTGAGCGCCTGCTTGGCCTTGATGGTGCCGTAGGTGACGATCTGGGCGACGCG 180
Query 39457 GTCGCTGCCGTACTTCTCGGTGACGTACCGGATCACGTCGCCACGGCGACGGTCATCGAA 39516
|||| |||||||||||| |||||||||||||| || || || || ||||| || |||||
Sbjct 181 GTCGTCGCCGTACTTCTCCGTGACGTACCGGATGACCTCCCCGCGCCGACGCTCGTCGAA 240
Query 39517 GTCGATGTCCACGTCGGGCATGGAGACGCGCTCAGGGTTCAGGAACCGCTCGAAGATGAG 39576
||||| ||| ||||||||||| || || ||||| ||||| ||||||||||||||||| ||
Sbjct 241 GTCGACGTCGACGTCGGGCATCGACACACGCTCGGGGTTGAGGAACCGCTCGAAGATCAG 300
Query 39577 CCC 39579
|||
Sbjct 301 CCC 303
>seq18795
Length=169
Score = 141 bits (156), Expect = 3e-29
Identities = 135/170 (79%), Gaps = 2/170 (1%)
Strand=Plus/Minus
Query 38337 TGTCGTCGCCCACCGAGGTG-AGCACGGCCGCCATGTACTCGGCCGGGTAGTGCGTCTTC 38395
||||||||| ||| | || || | |||||||||||||| | |||||||| || |||
Sbjct 169 TGTCGTCGCGCAC-GCTCTGCAGGAGCGCCGCCATGTACTCCGTCGGGTAGTTCGCCTTG 111
Query 38396 AGGTACGCCGTGCGGTAGGCGATGAGTCCGTACGCCGCAGAGTGCGCCTTGTTGAAGGCG 38455
||| ||||||| | ||| || | ||| |||||| | || |||||||||||||||||||||
Sbjct 110 AGGAACGCCGTCCAGTACGCCACGAGGCCGTACCCGGCGGAGTGCGCCTTGTTGAAGGCG 51
Query 38456 TACCCGGCGAAGGGTACGAGCACGTCCCACACCGCCCGGATGGCAGCGTC 38505
|| || ||||| || || ||| |||||| |||||| |||| || |||||
Sbjct 50 TAGCCCGCGAACGGGACCAGCGTGTCCCAGACCGCCTGGATCGCGGCGTC 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 160192432555700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |