Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177945.1_202017-04- 26] 24,998 sequences; 12,874,792 total letters Query= NC_030917.1 Length=93577 Score E Sequences producing significant alignments: (Bits) Value seq10739 309 2e-79 seq18974 183 2e-41 seq22324 165 5e-36 seq24856 134 8e-27 >seq10739 Length=312 Score = 309 bits (342), Expect = 2e-79 Identities = 251/304 (83%), Gaps = 0/304 (0%) Strand=Plus/Plus Query 78280 CGGCAACTTCTGGTTGCCCGAGAAGGTACCGGTGTCCAACGACATCCCATCCTGGGACAC 78339 ||| ||||||||| |||||||||| || |||||||| |||||||||| || ||| |||| Sbjct 4 CGGGAACTTCTGGCTGCCCGAGAAAGTGCCGGTGTCGAACGACATCCAGTCGTGGAACAC 63 Query 78340 CCTTACGCCGGAAGAGAAGGAACTCACTATGCGTGTGTTCACCGGCCTCACCCTGCTCGA 78399 || || || | ||| |||| ||||| ||||| || ||||||||||| || ||||| || Sbjct 64 GCTCACCGCGCAGGAGCAGGAGCTCACGATGCGCGTATTCACCGGCCTGACGCTGCTGGA 123 Query 78400 CACCATCCAGGGCACAGTTGGCGCCATCTCGCTCATCGCCGACGCCAACACCCCGCACGA 78459 ||| ||||||||||| || ||||| | ||||||||| ||||||| | ||| |||||||| Sbjct 124 CACGATCCAGGGCACGGTCGGCGCGGTGTCGCTCATCCCCGACGCGATCACGCCGCACGA 183 Query 78460 GGAGGCGGTGCTCACCAACATCGCGTTCATGGAGTCGGTACACGCCAAGTCCTACAGCTC 78519 ||| |||||| ||||||||||||||||||||||||||| ||||||||| |||| || Sbjct 184 GGAAGCGGTGTACACCAACATCGCGTTCATGGAGTCGGTGCACGCCAAGAGCTACTCGTC 243 Query 78520 GATCTTCTCAACGCTATGCTCCTCCAAGCAGATTGACGAGGCGTTCCGTTGGTCGGAGGA 78579 ||||||||| ||||| |||||| | |||| ||||| |||||||| ||||||||||| Sbjct 244 GATCTTCTCGACGCTGTGCTCCACTCGTGAGATCGACGACGCGTTCCGCTGGTCGGAGGA 303 Query 78580 GAAC 78583 |||| Sbjct 304 GAAC 307 >seq18974 Length=223 Score = 183 bits (202), Expect = 2e-41 Identities = 149/181 (82%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 78644 AAGCGGAAGGTGGCCAGTACGCTCCTGGAGGGCTTCCTCTTCTACTCGGGCTTCTACCTG 78703 ||||| ||||| || || ||||| || ||| |||||||||||||| |||||||||||| Sbjct 6 AAGCGCAAGGTCGCGAGCACGCTGCTCGAGTCATTCCTCTTCTACTCCGGCTTCTACCTG 65 Query 78704 CCGATGTACTGGTCGAGCCGCGCCAAGCTGACGAACACCGCGGACGTGATCCGGTTGATT 78763 ||||||||||||||| |||||||||||||||||||| || ||| | ||||| | || Sbjct 66 CCGATGTACTGGTCGTCGCGCGCCAAGCTGACGAACACGGCCGACCTCATCCGCCTCATC 125 Query 78764 ATCCGAGACGAAGCAGTTCATGGGTACTACATCGGATACAAGTACCAGCGAGGCCTCGAG 78823 ||||| ||||| || || || |||||||||||||| ||||||| |||| || |||||| Sbjct 126 ATCCGCGACGAGGCCGTGCACGGGTACTACATCGGCTACAAGTTCCAGAAGGGTCTCGAG 185 Query 78824 A 78824 | Sbjct 186 A 186 >seq22324 Length=160 Score = 165 bits (182), Expect = 5e-36 Identities = 130/153 (85%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 78905 TACACCGAGCAGCTCTATGACGACGTCGGACTCACCGAGGATGTCAAGAAGTTCCTGCGC 78964 ||||| ||| | ||||| |||| |||||| || |||||||| ||||||||||||||||| Sbjct 7 TACACGGAGGACCTCTACGACGGCGTCGGGCTGACCGAGGACGTCAAGAAGTTCCTGCGG 66 Query 78965 TACAACGGCAACAAGGCGCTGATGAACCTCGGCTACGAAGCACTGTTCCCCAAGGAAGAG 79024 ||||||| |||||||||||| ||||||||||||||||| || || ||||||||||| ||| Sbjct 67 TACAACGCCAACAAGGCGCTCATGAACCTCGGCTACGAGGCGCTCTTCCCCAAGGACGAG 126 Query 79025 ACC-ATGGCAGACCCGGCCATCATGTCCGCGCT 79056 ||| | | || ||||||| ||| | || ||||| Sbjct 127 ACCGACGTCA-ACCCGGCGATCCTCTCGGCGCT 158 >seq24856 Length=168 Score = 134 bits (148), Expect = 8e-27 Identities = 130/167 (78%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 69651 ATCGGTAACCTGACCGCCGACCCCGAACTCCGGTTCACGCCCTCCGGTGCCGCGGTCGCG 69710 ||||| ||||| |||| ||||| || || || ||||| ||||| ||||| ||||| || Sbjct 2 ATCGGGAACCTCACCGGAGACCCGGAGCTGCGTTTCACCCCCTCGGGTGCGGCGGTGGCC 61 Query 69711 AACTTCACCGTCGCGTCGACCCCGCGGTACTTCGACAAGCAGTCGAACGAGTGGAAGGAT 69770 |||||||| || ||||| || |||||| ||||||| |||||||||||||||||||| Sbjct 62 AACTTCACGGTGGCGTCCACGCCGCGGACCTTCGACCGCCAGTCGAACGAGTGGAAGGAC 121 Query 69771 GCCGAGGCACTCTTCCTGCGCTGCAACGTCTGGCGCGAGTACGCCGA 69817 | || | || ||| |||||||| ||||||||||| ||| || Sbjct 122 GGGGACACCCTGTTCATGCGCTGCTCGATCTGGCGCGAGGCCGCGGA 168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299230407745964