Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177945.1_202017-04- 26] 24,998 sequences; 12,874,792 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq17588 178 8e-40 seq24722 152 3e-32 >seq17588 Length=238 Score = 178 bits (196), Expect = 8e-40 Identities = 179/233 (77%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 821 GGCAAGTCGAAGGATGATCGCACCGGCACCGGCACGCTGAGCAAGTTCGGCGCCCAGCTG 880 |||| | | |||| || ||||| || || ||||||| ||| ||||||| |||||| Sbjct 4 GGCACGCCCAAGGGCGACCGCACGGGGACGGGCACGCGCAGCGTGTTCGGCCGCCAGCTC 63 Query 881 CGGTACGACCTCACCGAGGGCTTCCCGCTGGTCACCACGAAGCGCGTCCACTTCAAATCG 940 || | ||||||| | ||||||||||||| |||| ||||||||||| ||| |||| || Sbjct 64 CGCTTCGACCTCGCGCAGGGCTTCCCGCTCATCACGACGAAGCGCGTGCACCTCAAGTCC 123 Query 941 GTTGCGTACGAACTTCTGTGGTTCCTCAGTGGCGACACGAACGTGAAGGCGCTCAACGAC 1000 || || ||||| || ||||||||||| | |||||| |||||||| |||| | || Sbjct 124 GTCGCCTACGAGCTGCTGTGGTTCCTGCGCGGCGACTCGAACGTGCGCTGGCTCCAGGAG 183 Query 1001 AACGGCGTCACCATCTGGGACGAGTGGGCCGACGCCGGCGGAAACCTCGGTCC 1053 |||||| |||||||||||||||||||||||||| ||| | ||||| || Sbjct 184 CGCGGCGTGCGCATCTGGGACGAGTGGGCCGACGCCGACGGCGAGCTCGGCCC 236 >seq24722 Length=183 Score = 152 bits (168), Expect = 3e-32 Identities = 141/179 (79%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 1241 TACGTCGTCGACGGCCGGCTCTCGCTGCAGGTCTACCAGCGCAGCGCGGACATGTTCCTC 1300 ||||| | |||||||||||||||| ||| ||||||||||| |||||| | |||||| Sbjct 5 TACGTGGCCGACGGCCGGCTCTCGTGCCAGCTCTACCAGCGCTCGGCGGACCTCTTCCTC 64 Query 1301 GGTGTGCCGTTCAATATCGCCTCGTACGCGCTCCTCGCGCACATGTTCGCGCAGCAGGCC 1360 || ||||||||||| ||||| ||||||||||| |||| |||||| |||| |||| || Sbjct 65 GGGGTGCCGTTCAACATCGCGTCGTACGCGCTGCTCGTCCACATGGTCGCCGCGCAGACC 124 Query 1361 GGCCTGCGGGTGGGTGAGCTGATCTGGACCGGCGGCGACTGCCACATCTACAACAACCA 1419 ||||| ||| || || | | |||||||| | |||| ||||||||| ||||||| Sbjct 125 GGCCTCGAGGTCGGCGACTTCGTGTGGACCGGAGTCGACGTGCACATCTACGACAACCA 183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 296040979743198