Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177945.1_202017-04- 26] 24,998 sequences; 12,874,792 total letters Query= NC_031078.1 Length=50082 Score E Sequences producing significant alignments: (Bits) Value seq11981 217 5e-52 seq18795 141 3e-29 >seq11981 Length=303 Score = 217 bits (240), Expect = 5e-52 Identities = 230/303 (76%), Gaps = 0/303 (0%) Strand=Plus/Plus Query 39929 GTAGCGCGGGTGCTCCGGGTTGAAGATGCCCTCCAGGGGCATCGAGTTGCCCATCACGTC 39988 ||| ||| ||||| |||| |||||| ||| |||||| || |||||||||||| | Sbjct 1 GTACCGCTCGTGCTTGGGGTCGAAGATCCCCGACAGGGGGATGTCCTTGCCCATCACGGC 60 Query 39989 GGCCGGGTACGCCTTGGTCAGCTTCTCGCCGACCTGGAAGGGCTTGTCCAGCACGCGCGC 40048 | ||| ||||||||| |||||||| || | | |||||| | | || | ||||| Sbjct 61 CGGCGGCATCGCCTTGGTGAGCTTCTCCCCCATCGCGAAGGGGAAGCCGAGGAGCCGCGC 120 Query 40049 CGCGTCCTTCATCGCGTTGCGCGCCTTGATCCGACCGAAGGTCCCGATCTGTGCGACCTT 40108 || |||||| | ||| | |||||||| ||| |||| ||||||| ||||| Sbjct 121 CGAGTCCTTGAGCGCCTGCTTGGCCTTGATGGTGCCGTAGGTGACGATCTGGGCGACGCG 180 Query 40109 GTCCGCCCCGTACTTCTCGGTGACGTACCTGATCACGTCGCCCCGTCGCCGGTCATCGAA 40168 ||| | ||||||||||| |||||||||| ||| || || || || || || || ||||| Sbjct 181 GTCGTCGCCGTACTTCTCCGTGACGTACCGGATGACCTCCCCGCGCCGACGCTCGTCGAA 240 Query 40169 GTCGATGTCAACGTCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATGAG 40228 ||||| ||| ||||||||||| ||||| ||||||||||| ||||||||||||||||| || Sbjct 241 GTCGACGTCGACGTCGGGCATCGACACACGCTCGGGGTTGAGGAACCGCTCGAAGATCAG 300 Query 40229 CCC 40231 ||| Sbjct 301 CCC 303 >seq18795 Length=169 Score = 141 bits (156), Expect = 3e-29 Identities = 135/170 (79%), Gaps = 2/170 (1%) Strand=Plus/Minus Query 38989 TGTCGTCGCCCACCGAGGTG-AGCACGGCCGCCATGTACTCGGCCGGGTAGTGCGTCTTC 39047 ||||||||| ||| | || || | |||||||||||||| | |||||||| || ||| Sbjct 169 TGTCGTCGCGCAC-GCTCTGCAGGAGCGCCGCCATGTACTCCGTCGGGTAGTTCGCCTTG 111 Query 39048 AGGTACGCCGTGCGGTAGGCGATGAGACCGTACGCCGCAGAGTGCGCCTTGTTGAAGGCG 39107 ||| ||||||| | ||| || | ||| |||||| | || ||||||||||||||||||||| Sbjct 110 AGGAACGCCGTCCAGTACGCCACGAGGCCGTACCCGGCGGAGTGCGCCTTGTTGAAGGCG 51 Query 39108 TACCCGGCGAAGGGTACGAGCACGTCCCACACCGCCTGGATGGCACCGTC 39157 || || ||||| || || ||| |||||| ||||||||||| || |||| Sbjct 50 TAGCCCGCGAACGGGACCAGCGTGTCCCAGACCGCCTGGATCGCGGCGTC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160093262003344