Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177975.1_202017-04- 25] 7,075 sequences; 12,875,875 total letters Query= NC_009816.1 Length=70579 Score E Sequences producing significant alignments: (Bits) Value seq2852 244 5e-60 seq4075 122 4e-23 >seq2852 Length=1726 Score = 244 bits (270), Expect = 5e-60 Identities = 444/645 (69%), Gaps = 6/645 (1%) Strand=Plus/Minus Query 59910 TCATCGAACATAAGGTAAGGATAGCCAGACTCAAACTGAACCTCTGCGATGGTCTGGAAC 59969 || |||||||| | ||| || ||||| ||||| ||||| | ||| ||||| |||||||| Sbjct 1538 TCCTCGAACATGATGTACGGGTAGCCGGACTCGAACTGGAGCTCGGCGATCGTCTGGAAG 1479 Query 59970 AGCTTTCGAGCGTCGATAAAGGTCTTAGCGATCCTATCATCTTTTAGCCACGTGTCGTAC 60029 | | || || | ||| ||||| ||| | || | | | | ||||||| Sbjct 1478 AAGTCGCGCGCCTTGATCTTCGTCTTGCGGATGCGCGAGTCGTCGACCATCTCGTCGTAC 1419 Query 60030 ATCTCGGTTACGGAGAACTCGGACAGTGACTTTCCGTACACCTTATTGATGTCATAAGGA 60089 ||||||| | |||| |||| | | ||| ||||| || | || ||| || || Sbjct 1418 TTCTCGGTGATCGAGATGTCGGCGAACGGCTTGCCGTAGACGCGCTCGACGTCGTACGGC 1359 Query 60090 GAGAATAGGGCCATAGGCTCGCTCTCCTTGGCAAGGCGGAACGTGACATCAGGAACGATA 60149 ||||| ||| ||| |||| ||| ||| || || |||||||| || || | | Sbjct 1358 GAGAAGAGGTACATGTCCTCGTTCTTCTTCGCGAGCTCGAACGTGATGTCCGGGATCACG 1299 Query 60150 ACTCCTAGGGAGAGAGTCTTAATACGGATCTTCTCGTCGGCGTTTTCACGCTTGGTATCC 60209 || || || || || ||||| || |||||||||||||| ||||| || |||||||| || Sbjct 1298 ACGCCGAGCGACAGCGTCTTGATGCGGATCTTCTCGTCCGCGTTCTCGCGCTTGGTGTCG 1239 Query 60210 AGGAACGCAAGGATGTCGGGGTGGTGTGCGTTCAAATATACCGCCCCTGCGCCCTGCCTT 60269 |||||| | ||||||||||||||| |||| || || || || || |||||||| | Sbjct 1238 AGGAACCGCATGATGTCGGGGTGGTGCGCGTGCAGGTACACGGCACCGGCGCCCTGGCGC 1179 Query 60270 GCACCCAGTTGGTTAGAGTAGGAGAAGCTATCTTCTAGAATCTTCATCACAGGGATGACT 60329 || || || ||||| | ||||||||| || || || | ||||||||| |||||||| Sbjct 1178 GCGCCGAGCTGGTTCGCGTAGGAGAACGAGTCCTCGAGCAGCTTCATCACGGGGATGACG 1119 Query 60330 CCAGAGGCCTGACCTTCTCGA--CCCTTAATCGGAGCTCCTGCCTCGCGGAGGTTGGAGA 60387 || || | ||| ||||||| ||| || || || || |||||||| ||| || | Sbjct 1118 CCGGACGACTG--GTTCTCGATGTGCTTGATGGGCGCGCCGTGCTCGCGGATGTTCGACA 1061 Query 60388 ATCCAATGCCGACTCCGCCACCACGCTTAGACAGCTGGAGAGAGTCCTGAACGATTCGAC 60447 | | |||| ||||| || ||||| || ||||| || | | | | | || Sbjct 1060 GGAGCAGGGCGACGCCGCCGCCGCGCTTGGAGAGCTGCAGCGCGGAGTTGATGCCGCGCG 1001 Query 60448 CGATGGACCCCATGGTGTCCTGAACATCGAGGATGAAGCATGATACTGGCTTGCCTGCGT 60507 |||||||| ||||| |||||| | || | |||||| || || |||| ||| ||| Sbjct 1000 CGATGGACTCCATGTTGTCCTCGATGCGCAGCAGGAAGCACGACACGGGCTCGCC-GCGC 942 Query 60508 CGAGAAGCCCCG-CGTTGAGGAAGGTCGGAGTTGCAGGCTGGAAG 60551 | | ||| |||||||||| || || || || ||||||||| Sbjct 941 TGCGCCTTGCCGACGTTGAGGAACGTGGGGGTCGCGGGCTGGAAG 897 >seq4075 Length=460 Score = 122 bits (134), Expect = 4e-23 Identities = 261/385 (68%), Gaps = 10/385 (3%) Strand=Plus/Minus Query 58400 GCAGCTTAGGCAACCTTCCACTTCCGTGCCTTCTA---CCGACTTAGCAGAGGTTCGGAT 58456 |||||| | |||||| || || |||||||| || | || || | | |||| ||||| Sbjct 383 GCAGCTGACGCAACCCTCGACCTCCGTGCCCTCCAGGGCCATCTGA-CGGAGG--CGGAT 327 Query 58457 GTAGTACAGAGACTTCAGGCCCTTCTTGTGAGCGTAGATCTGCGCTCGGTTAATGTCTCG 58516 |||||| || | ||| | |||||| |||||||||||||| ||||| | ||| || Sbjct 326 GTAGTAGAGCGTCTTGATGCCCTTGCGCCACGCGTAGATCTGCGCGCGGTTGACGTCGCG 267 Query 58517 CGTTGTCGCTGTATCTGGGAAGAACAGCGTGAGAGACATGCCCTGGTCTACCCAAGGAGA 58576 ||| || | || || ||||||||||||||| || |||||||| || | | Sbjct 266 CGTCGTGACCGTGTCCTTGAAGAACAGCGTGAGGCTCAGACCCTGGTCGACGTGCTGCGT 207 Query 58577 TGCTACAGCGTACATATCAATGATCGGGT--TAGGTCCGATAGCGTAAGCGCTATCAATT 58634 || | |||||| | || |||||| | ||| ||||| |||| ||| || Sbjct 206 CGCGGCGGCGTACGTGTCGATGATCTTCTCGTAG--CCGATCTCGTACGCGTCCTCGTAG 149 Query 58635 GATTCTACATTCTCATTGGTCACTCCGTACTGAGGGTAATAGACTCGACCAAGCTTACCC 58694 | || | || || || |||| | | ||||| ||||| || || | ||| ||| Sbjct 148 TACTCGAGGTTGTCGTTCGTCAGGTAGGGCGCCGGGTAGTAGACGCGCCCGATCTTGCCC 89 Query 58695 TCCTTGCGAACCTCAACAGGAGAGGTCACAGGGTGAATCGAGGCCGTGGCATGGTTAATG 58754 |||||||| | ||| | || | ||| ||||| ||||||| ||| | | ||| ||| Sbjct 88 TCCTTGCGGATCTCGATCTTCGACGGCACCGGGTGGATCGAGGACGTCGAGTTGTTGATG 29 Query 58755 TACGAGATAGAGCCGGTTGGTGGGA 58779 || ||||| ||||| || || |||| Sbjct 28 TAGGAGATCGAGCCCGTCGGCGGGA 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 225708536250500