Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177975.1_202017-04- 25] 7,075 sequences; 12,875,875 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq244 197 2e-45 >seq244 Length=7683 Score = 197 bits (218), Expect = 2e-45 Identities = 830/1300 (64%), Gaps = 34/1300 (3%) Strand=Plus/Plus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 || ||||||| ||| ||| || || || ||||| | |||||| ||||||| ||||| Sbjct 4916 TACATATTGGAAGTGACTGGTTCGAAACATTCATTATAACCCAATATTTGGGATGTGGAT 4975 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATG-CGTTC 114060 || || ||||| ||||||||| | | || | | ||| | | | | || | || Sbjct 4976 GCAGTAGGCATTGGTGCCATGGTCAAGGAATTTCTAATACCATGCTTCATGATATCTTTT 5035 Query 114061 CTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAG 114120 ||| ||| |||||| || | || | | | | ||||||||||||||| || Sbjct 5036 CTTAAGGT-GTCCCAATCCCACATGCCGTAGGGTTTTTGGTCCCACATATCAAACTGTAG 5094 Query 114121 GATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAA 114180 |||||||| || || || ||||| | || || |||||||| || || || || | Sbjct 5095 TATACCTTGAGAAGCAGGAGATCCTTGGAAAGTTTCGTATGGACCGTCCTTCTGAGCTAG 5154 Query 114181 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGC 114240 ||| | || || | || || ||||| || || ||||| || | ||| | Sbjct 5155 TTCACAAGAAGCTTCCATGGAGGCATGATAAATAGTTTCAAAGATTTGGATATTTAGCAA 5214 Query 114241 CTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTG 114300 ||| || || |||||||| | | || ||| || || || ||||||||||| Sbjct 5215 ACGGGCTTCCTCAGAATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGACCTTG 5274 Query 114301 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATA 114360 ||||| | ||||||| | |||||||||||| || |||| || || || || || Sbjct 5275 AACACCCAAAGCAATTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACAGGGTA 5334 Query 114361 AAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAG 114420 |||| | ||| || || || |||| ||| || ||||| || | |||||||| | Sbjct 5335 GTAATTACGATCAATGACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCATGTAA 5394 Query 114421 CTTTTCGTAATCAAAACTGCGAGTCT---------------CTTCATTGACATACTTAGG 114465 |||| | | | | || ||||| |||| ||| || || || Sbjct 5395 TTTTTTGAAGTTGTATGTGGAAGTCTTACCATCCTCAGAAGTTTCAATGA-ATGCT--GG 5451 Query 114466 AAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAAT 114525 | ||| | || |||| ||||| |||| || ||||| | | | ||| || | ||| Sbjct 5452 TAAGGCAACGGAAGCCAAGTTACAAACAGCAGTTTCATCTGGAGCTGAGTATTCAACAAT 5511 Query 114526 TTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT 114585 ||| || || ||||| ||| ||| || ||||| |||||||| || ||| |||| Sbjct 5512 TTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGATTAGATTTTCTGTT 5571 Query 114586 ACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGC 114645 ||| ||||||||||||| | | | || || || || || ||||| | | | ||| | Sbjct 5572 ACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAAATGGA 5631 Query 114646 CTTCCAGACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGT 114705 | ||| | | |||| | ||| || | || || || | |||||| || Sbjct 5632 ATACCATAATTTTTGGGCTTTGATAGT---CTTACCACGACCTTCTTTCTCGTAGCGGGT 5688 Query 114706 GTAGAGGGCTTCAAACTCTTCACC--CACGGCCTCTGAGAGCCCTGGTGCCTTAT-CTGG 114762 || || || |||||||| ||||| || | || | | || || | || || ||| Sbjct 5689 ATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAA--CCAGGAG-CTGATGTTGG 5745 Query 114763 GCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCA 114822 |||| | | ||| ||| || || |||||||||||||| || || || ||||| Sbjct 5746 AGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCA 5805 Query 114823 GAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTC 114882 ||||| | ||| | ||| | ||| ||| || | || || || | | || Sbjct 5806 TAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATC 5865 Query 114883 CAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCT 114938 | ||| || | ||||| || ||||| ||||||||||| | || | | ||| || Sbjct 5866 AATAAAATCAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCT 5925 Query 114939 TACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAA 114998 | | |||| |||||| ||||| | || ||| ||| || || |||| ||| |||| Sbjct 5926 T-TTATTACCACCCTGGTCAACATAACGGGCAGTGTTATTGAAAACACGAATCATAGGAA 5984 Query 114999 TGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCAT 115058 | | ||| | ||| || ||||| || ||| ||| | | | | | | || Sbjct 5985 TTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTAT 6044 Query 115059 GGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGC 115118 |||| || | ||||||||| || || || || || || || ||| | | || Sbjct 6045 GGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGT 6104 Query 115119 CGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTG 115178 |||| ||||| ||||| ||||| |||| | || | | ||| || |||||||| | Sbjct 6105 CGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAG 6164 Query 115179 GCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTG 115218 | |||| ||||| || ||||| | ||||| | ||||| Sbjct 6165 GTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTG 6204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597300771541000