Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177975.1_202017-04- 25] 7,075 sequences; 12,875,875 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq5541 147 1e-30 seq4752 113 2e-20 seq6851 96.9 2e-15 >seq5541 Length=284 Score = 147 bits (162), Expect = 1e-30 Identities = 189/260 (73%), Gaps = 13/260 (5%) Strand=Plus/Plus Query 59353 GGCCGTCGCCAACTTCACCGTCGTGTCCAACGAACGCCGCCG-----CGACGCCCAGGGC 59407 ||| || ||||||||||| || | ||||| |||||| | |||| |||| Sbjct 17 GGCGGTGGCCAACTTCACGGTGGCGTCCA-----CGCCGCGGACCTTCGACCGCCAGTCG 71 Query 59408 AAC---TGGGTCGACGGCGACGCCACATTCCTCCGCTGCACCATCTGGCGCGACGCCGCC 59464 ||| ||| ||||| ||| || ||| | |||||| | ||||||||||| ||||| Sbjct 72 AACGAGTGGAAGGACGGGGACACCCTGTTCATGCGCTGCTCGATCTGGCGCGAGGCCGCG 131 Query 59465 GAGAACGTAGCGGAAAGCCTCCAGAAAGGCCAGCGCGTCATCGTGCATGGCTACCTCAAG 59524 |||||||| ||||| || ||| ||| ||||||||||||||| ||| |||| Sbjct 132 GAGAACGTCGCGGAGTCGCTGACGAAGGGCATGCGCGTCATCGTGCAGGGCCGCCTCGTC 191 Query 59525 CAGCGCTCCTTCGAGACCAAGGAAGGCGACAAGCGCACCGTCATCGAGGTGGAGGTAGAC 59584 |||||||| | ||||||| || || || |||||||||||| ||||| || |||| ||| Sbjct 192 CAGCGCTCGTACGAGACCCGCGAGGGGGAGAAGCGCACCGTCGTCGAGCTGCAGGTGGAC 251 Query 59585 GAGATCGGCCCGTCGCTGCG 59604 |||||| | || || ||||| Sbjct 252 GAGATCTGTCCCTCCCTGCG 271 >seq4752 Length=424 Score = 113 bits (124), Expect = 2e-20 Identities = 160/223 (72%), Gaps = 9/223 (4%) Strand=Plus/Minus Query 66240 CTGGTGCCGCGGGCGGAGCTCGAAGGGGACATCGGGGACTCGCACGTCGGCCTGCATGCC 66299 || ||||| ||||||| |||| || || || || ||| |||||||| || || ||| Sbjct 217 CTCGTGCCCAAGGCGGAGATCGAGGGCGAGATGGGCGACAGCCACGTCGGTCTCCAGGCC 158 Query 66300 CGCCTGATGTCTCAGGCCATGCGCAAGCTGACCGGCACGATTGCCAGCAC---CAACACG 66356 ||||| ||||| ||||| |||||||| | ||||| || | |||| | | |||| Sbjct 157 CGCCTCATGTCGCAGGCGCTGCGCAAGATCACCGGTGCGCT---CAGCGCGTCCGGCACG 101 Query 66357 CTCACCCTGTGGGTGAATCAGCTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAAT 66416 | || | | | || ||||| ||||||||||||||| ||| || |||| | Sbjct 100 ACCGCCATCTTCATCAACCAGCTCCGCGAGAAGATCGGC---GTGTTCTTCGGCTCTCCC 44 Query 66417 GAGACCACCACCGGTGGTAAGGCTCTGCGCTTCTACGCCTCGG 66459 ||||| || |||||||| ||||| ||| ||||||||||||| Sbjct 43 GAGACGACGACCGGTGGCAAGGCGCTGAAGTTCTACGCCTCGG 1 >seq6851 Length=160 Score = 96.9 bits (106), Expect = 2e-15 Identities = 120/163 (74%), Gaps = 6/163 (4%) Strand=Plus/Minus Query 50193 CTCGGCGCCATGCTTCTCTCCAAGAACGCCACCCCGGCCGTCATGGAG---ATTCTCAAG 50249 ||||||| |||||| || || ||| |||||| | ||| |||||| ||| || | | Sbjct 160 CTCGGCGGCATGCTGCTGTCGAAGGACGCCATCGCGGACGTCATCGAGCAGATCCGCGGC 101 Query 50250 CCCGAGGACTTCTACCGCCCCAACCACGCCACCGTCTACCAGATCATCACCGACCTCTAC 50309 |||| |||||||||||| |||| | ||||||| || |||| |||||||||| Sbjct 100 TCCGA---CTTCTACCGCCCGGCGCACGAGATCGTCTACGAGTCGATCATCGACCTCTAC 44 Query 50310 ATGGCCGGTGAGTCCGCCGACGTCATCACCGTCGCCGCGGAGC 50352 ||| ||| ||||||||| |||||||||| |||||||| Sbjct 43 GGTCGCGGCGAGCCCGCCGACGCGATCACCGTCGTCGCGGAGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242449492610900