Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177975.1_202017-04- 25] 7,075 sequences; 12,875,875 total letters Query= NC_011273.1 Length=164602 Score E Sequences producing significant alignments: (Bits) Value seq1967 632 2e-176 seq241 286 4e-72 seq5161 251 8e-62 seq1322 114 1e-20 seq5911 82.4 8e-11 >seq1967 Length=687 Score = 632 bits (700), Expect = 2e-176 Identities = 505/608 (83%), Gaps = 0/608 (0%) Strand=Plus/Plus Query 155933 GCGCCATCAACTGGAACCGCGTGATCGACGAGAAGGACGCGGAGGTGTGGAACCGGCTGA 155992 |||| |||||||||||||| | |||||||||||| ||||||||| |||| || Sbjct 42 GCGCGATCAACTGGAACCGTCTCGAGGACGAGAAGGACCTCGAGGTGTGGGACCGCCTCG 101 Query 155993 CCAACAACTTCTGGCTGCCGGAGAAGATCCCGGTGTCCAATGACGTCCAGTCGTGGCACC 156052 | |||||||||||||| ||||| | |||||||| || ||| ||||||||||| || Sbjct 102 TCGGGAACTTCTGGCTGCCCGAGAAAGTGCCGGTGTCGAACGACATCCAGTCGTGGAACA 161 Query 156053 AGCTGACCGAGGAAGAGCGCCTGATCACCATGCGGGTGTTCACCGGCCTGACGATGCTGG 156112 ||| |||| | | |||| | |||| ||||| || ||||||||||||||| |||||| Sbjct 162 CGCTCACCGCGCAGGAGCAGGAGCTCACGATGCGCGTATTCACCGGCCTGACGCTGCTGG 221 Query 156113 ACACCATCCAGGGCACCGTCGGCGCGGTCTCGCTCATCCCGGACGCCATCACCCCGCACG 156172 |||| ||||||||||| ||||||||||| ||||||||||| ||||| ||||| ||||||| Sbjct 222 ACACGATCCAGGGCACGGTCGGCGCGGTGTCGCTCATCCCCGACGCGATCACGCCGCACG 281 Query 156173 AGGAGGCGGTGTACACCAACATCGCGTTCATGGAGAGCGTGCACGCACGCAGCTACTCGA 156232 |||| |||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct 282 AGGAAGCGGTGTACACCAACATCGCGTTCATGGAGTCGGTGCACGCCAAGAGCTACTCGT 341 Query 156233 ACATCTTCTCGACGCTGTGCTCCACCAAGGAGATCGACGCCGCGTTCCGCTGGTCGGAGG 156292 ||||||||||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct 342 CGATCTTCTCGACGCTGTGCTCCACTCGTGAGATCGACGACGCGTTCCGCTGGTCGGAGG 401 Query 156293 AGAACGCCAACCTGCAGAAGAAGGCTGAGATCGTGCTCAGCTACTACAACGGTGACGACC 156352 ||||| | ||||| ||| ||||| |||||||| | ||||||||| || ||| | Sbjct 402 AGAACCCGAACCTCCAGCGCAAGGCCGAGATCGTCATGGACTACTACAAGGGCGACTCGC 461 Query 156353 CGCTCAAGCGCAAGGTCGCCTCCACGCTGCTGGAGGGCTTCCTGTTCTACAGCGGCTTCT 156412 ||||||||||||||||||| ||||||||| ||| ||||| |||||| |||||||| Sbjct 462 CGCTCAAGCGCAAGGTCGCGAGCACGCTGCTCGAGTCATTCCTCTTCTACTCCGGCTTCT 521 Query 156413 ACCTGCCGATGTTCTGGTCGTCGCGAGGCAAGCTCACCAACACCGCCGACATGATCCGGC 156472 |||||||||||| |||||||||||| | |||||| || ||||| |||||| | ||||| | Sbjct 522 ACCTGCCGATGTACTGGTCGTCGCGCGCCAAGCTGACGAACACGGCCGACCTCATCCGCC 581 Query 156473 TCATCATCCGGGACGAGGCCGTGCACGGCTACTACATCGGCTACAAGTTCCAGAAGGGCC 156532 |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct 582 TCATCATCCGCGACGAGGCCGTGCACGGGTACTACATCGGCTACAAGTTCCAGAAGGGTC 641 Query 156533 TGGAGAAG 156540 | |||||| Sbjct 642 TCGAGAAG 649 >seq241 Length=388 Score = 286 bits (316), Expect = 4e-72 Identities = 253/314 (81%), Gaps = 4/314 (1%) Strand=Plus/Minus Query 156562 GAACTCAAGGACTACACCTATGAGCTGCTGTTCGAGCTGTTCGACAACGAGCAGGAGTAC 156621 || ||||||| ||||| | |||||||| |||||||||| ||| |||||| | ||||| Sbjct 358 GAGCTCAAGGCGTACACGTTCGAGCTGCTCTTCGAGCTGTACGAGAACGAGGTGCAGTAC 299 Query 156622 ACCCAGGACCTCTACGACGCCACCGGCCAGACCGAGGACGTGAAGAAGTTCCTGCGGTAC 156681 || ||||||||||||||| | ||| | |||||||||||| |||||||||||||||||| Sbjct 298 ACGGAGGACCTCTACGACGGCGTCGGGCTGACCGAGGACGTCAAGAAGTTCCTGCGGTAC 239 Query 156682 AACGGCAACAAGGCCCTGCAGAACCTGGGCTACGACGCGCTGTTCAGCCGCAG--CGACT 156739 |||| ||||||||| || |||||| |||||||| ||||| ||| || || ||| Sbjct 238 AACGCCAACAAGGCGCTCATGAACCTCGGCTACGAGGCGCTCTTC--CCCAAGGACGAGA 181 Query 156740 GCGACGTCAACCCGGCCATCCTGAGCGCGCTGTCGCCCGGTGGAGACGAGAACCACGACT 156799 ||||||||||||||| ||||| ||||||||||| | |||||||||||||||| Sbjct 180 CCGACGTCAACCCGGCGATCCTCTCGGCGCTGTCGCCGAACGCCGACGAGAACCACGACT 121 Query 156800 TCTTCTCGGGGTCGGGCAGCACGTACGTCATGGCCAAGGGTGTGGTCACCGAAGACGACG 156859 ||||||| ||||| ||| |||||||||| | ||||| ||| |||||| ||||||| Sbjct 120 TCTTCTCCGGGTCCGGCTCGTCGTACGTCATCGGCAAGGCCGTGAACACCGAGGACGACG 61 Query 156860 ACTGGGACTTCTGA 156873 |||||||||||||| Sbjct 60 ACTGGGACTTCTGA 47 >seq5161 Length=301 Score = 251 bits (278), Expect = 8e-62 Identities = 201/242 (83%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 153078 GAGATCATCGGCCACGGCCAGCAGGCACCCACCGGGCACATCCCGTTCACCGACCGCTCC 153137 |||||||||||| | ||||||||||| || | |||||||||||||||||| ||| || Sbjct 285 GAGATCATCGGCGAGGGCCAGCAGGCCCCGAGCGGGCACATCCCGTTCACGCCGCGCGCC 226 Query 153138 AAGCGCGTCCTGGAGCTGTCGCTGCGCGAGGCGCTGCAGCTCGGCCACAACTACATCGGC 153197 ||| || || ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 225 AAGAAGGTGCTCGAGCTGTCGCTGCGCGAGGCGCTCCAGCTCGGCCACAACTACATCGGC 166 Query 153198 ACCGAGCATCTCCTGCTGGCCCTGATCCGCGAGGGTGAGGGCGTGGGCTGCCAGGTGCTG 153257 |||||||| ||||||| | ||| ||||||||||| |||||||| | | |||||| ||| Sbjct 165 ACCGAGCACATCCTGCTCGGCCTCATCCGCGAGGGCGAGGGCGTCGCCGCCCAGGTCCTG 106 Query 153258 GTGAAGCGCGGCGCGGAGCTGACCAAGGTCCGCCAGGTGGTCATCCAGCTGCTGTCCGGG 153317 |||| ||||| || || | |||||| |||||| |||||||||||| |||||||| Sbjct 105 ACGAAGATGGGCGCCGACCTCAACAAGGTGCGCCAGCAGGTCATCCAGCTCCTGTCCGGC 46 Query 153318 TA 153319 || Sbjct 45 TA 44 >seq1322 Length=169 Score = 114 bits (126), Expect = 1e-20 Identities = 90/108 (83%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 152885 CATCTTCGAGAGATTCACCGACCGCGCCCGTCGCGTCTGCGTCCTCGCCCAAGAGGAAGC 152944 ||| |||||||||||||| ||||| |||||||| ||| |||||||||||| || || || Sbjct 61 CATGTTCGAGAGATTCACAGACCGAGCCCGTCGGGTCGTCGTCCTCGCCCAGGAAGAGGC 120 Query 152945 GCGCATGCTCAACCATGCGTACATCGGCACCGAGCATCTGCTGCTCGG 152992 ||| ||||||||||| ||||||||||||||||| | || ||||| Sbjct 121 GCGGATGCTCAACCACAACTACATCGGCACCGAGCACATCCTCCTCGG 168 >seq5911 Length=212 Score = 82.4 bits (90), Expect = 8e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 92615 GCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTCAAAT 92674 ||||||| ||||||||||||||||||| ||||||||||| |||| || ||||||||| Sbjct 103 GCGGGGTGGAGCAGCTCGGTAGCTCGCTGGGCTCATAACCCAGAGGTCGCAGGTTCAAAT 44 Query 92675 CCCACTCCCGCCACT 92689 || | ||||| ||| Sbjct 43 CCTGCCCCCGCTACT 29 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 526551828954000