Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177975.1_202017-04-
25] 7,075 sequences; 12,875,875 total letters
Query= NC_011273.1
Length=164602
Score E
Sequences producing significant alignments: (Bits) Value
seq1967 632 2e-176
seq241 286 4e-72
seq5161 251 8e-62
seq1322 114 1e-20
seq5911 82.4 8e-11
>seq1967
Length=687
Score = 632 bits (700), Expect = 2e-176
Identities = 505/608 (83%), Gaps = 0/608 (0%)
Strand=Plus/Plus
Query 155933 GCGCCATCAACTGGAACCGCGTGATCGACGAGAAGGACGCGGAGGTGTGGAACCGGCTGA 155992
|||| |||||||||||||| | |||||||||||| ||||||||| |||| ||
Sbjct 42 GCGCGATCAACTGGAACCGTCTCGAGGACGAGAAGGACCTCGAGGTGTGGGACCGCCTCG 101
Query 155993 CCAACAACTTCTGGCTGCCGGAGAAGATCCCGGTGTCCAATGACGTCCAGTCGTGGCACC 156052
| |||||||||||||| ||||| | |||||||| || ||| ||||||||||| ||
Sbjct 102 TCGGGAACTTCTGGCTGCCCGAGAAAGTGCCGGTGTCGAACGACATCCAGTCGTGGAACA 161
Query 156053 AGCTGACCGAGGAAGAGCGCCTGATCACCATGCGGGTGTTCACCGGCCTGACGATGCTGG 156112
||| |||| | | |||| | |||| ||||| || ||||||||||||||| ||||||
Sbjct 162 CGCTCACCGCGCAGGAGCAGGAGCTCACGATGCGCGTATTCACCGGCCTGACGCTGCTGG 221
Query 156113 ACACCATCCAGGGCACCGTCGGCGCGGTCTCGCTCATCCCGGACGCCATCACCCCGCACG 156172
|||| ||||||||||| ||||||||||| ||||||||||| ||||| ||||| |||||||
Sbjct 222 ACACGATCCAGGGCACGGTCGGCGCGGTGTCGCTCATCCCCGACGCGATCACGCCGCACG 281
Query 156173 AGGAGGCGGTGTACACCAACATCGCGTTCATGGAGAGCGTGCACGCACGCAGCTACTCGA 156232
|||| |||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 282 AGGAAGCGGTGTACACCAACATCGCGTTCATGGAGTCGGTGCACGCCAAGAGCTACTCGT 341
Query 156233 ACATCTTCTCGACGCTGTGCTCCACCAAGGAGATCGACGCCGCGTTCCGCTGGTCGGAGG 156292
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct 342 CGATCTTCTCGACGCTGTGCTCCACTCGTGAGATCGACGACGCGTTCCGCTGGTCGGAGG 401
Query 156293 AGAACGCCAACCTGCAGAAGAAGGCTGAGATCGTGCTCAGCTACTACAACGGTGACGACC 156352
||||| | ||||| ||| ||||| |||||||| | ||||||||| || ||| |
Sbjct 402 AGAACCCGAACCTCCAGCGCAAGGCCGAGATCGTCATGGACTACTACAAGGGCGACTCGC 461
Query 156353 CGCTCAAGCGCAAGGTCGCCTCCACGCTGCTGGAGGGCTTCCTGTTCTACAGCGGCTTCT 156412
||||||||||||||||||| ||||||||| ||| ||||| |||||| ||||||||
Sbjct 462 CGCTCAAGCGCAAGGTCGCGAGCACGCTGCTCGAGTCATTCCTCTTCTACTCCGGCTTCT 521
Query 156413 ACCTGCCGATGTTCTGGTCGTCGCGAGGCAAGCTCACCAACACCGCCGACATGATCCGGC 156472
|||||||||||| |||||||||||| | |||||| || ||||| |||||| | ||||| |
Sbjct 522 ACCTGCCGATGTACTGGTCGTCGCGCGCCAAGCTGACGAACACGGCCGACCTCATCCGCC 581
Query 156473 TCATCATCCGGGACGAGGCCGTGCACGGCTACTACATCGGCTACAAGTTCCAGAAGGGCC 156532
|||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 582 TCATCATCCGCGACGAGGCCGTGCACGGGTACTACATCGGCTACAAGTTCCAGAAGGGTC 641
Query 156533 TGGAGAAG 156540
| ||||||
Sbjct 642 TCGAGAAG 649
>seq241
Length=388
Score = 286 bits (316), Expect = 4e-72
Identities = 253/314 (81%), Gaps = 4/314 (1%)
Strand=Plus/Minus
Query 156562 GAACTCAAGGACTACACCTATGAGCTGCTGTTCGAGCTGTTCGACAACGAGCAGGAGTAC 156621
|| ||||||| ||||| | |||||||| |||||||||| ||| |||||| | |||||
Sbjct 358 GAGCTCAAGGCGTACACGTTCGAGCTGCTCTTCGAGCTGTACGAGAACGAGGTGCAGTAC 299
Query 156622 ACCCAGGACCTCTACGACGCCACCGGCCAGACCGAGGACGTGAAGAAGTTCCTGCGGTAC 156681
|| ||||||||||||||| | ||| | |||||||||||| ||||||||||||||||||
Sbjct 298 ACGGAGGACCTCTACGACGGCGTCGGGCTGACCGAGGACGTCAAGAAGTTCCTGCGGTAC 239
Query 156682 AACGGCAACAAGGCCCTGCAGAACCTGGGCTACGACGCGCTGTTCAGCCGCAG--CGACT 156739
|||| ||||||||| || |||||| |||||||| ||||| ||| || || |||
Sbjct 238 AACGCCAACAAGGCGCTCATGAACCTCGGCTACGAGGCGCTCTTC--CCCAAGGACGAGA 181
Query 156740 GCGACGTCAACCCGGCCATCCTGAGCGCGCTGTCGCCCGGTGGAGACGAGAACCACGACT 156799
||||||||||||||| ||||| ||||||||||| | ||||||||||||||||
Sbjct 180 CCGACGTCAACCCGGCGATCCTCTCGGCGCTGTCGCCGAACGCCGACGAGAACCACGACT 121
Query 156800 TCTTCTCGGGGTCGGGCAGCACGTACGTCATGGCCAAGGGTGTGGTCACCGAAGACGACG 156859
||||||| ||||| ||| |||||||||| | ||||| ||| |||||| |||||||
Sbjct 120 TCTTCTCCGGGTCCGGCTCGTCGTACGTCATCGGCAAGGCCGTGAACACCGAGGACGACG 61
Query 156860 ACTGGGACTTCTGA 156873
||||||||||||||
Sbjct 60 ACTGGGACTTCTGA 47
>seq5161
Length=301
Score = 251 bits (278), Expect = 8e-62
Identities = 201/242 (83%), Gaps = 0/242 (0%)
Strand=Plus/Minus
Query 153078 GAGATCATCGGCCACGGCCAGCAGGCACCCACCGGGCACATCCCGTTCACCGACCGCTCC 153137
|||||||||||| | ||||||||||| || | |||||||||||||||||| ||| ||
Sbjct 285 GAGATCATCGGCGAGGGCCAGCAGGCCCCGAGCGGGCACATCCCGTTCACGCCGCGCGCC 226
Query 153138 AAGCGCGTCCTGGAGCTGTCGCTGCGCGAGGCGCTGCAGCTCGGCCACAACTACATCGGC 153197
||| || || ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 225 AAGAAGGTGCTCGAGCTGTCGCTGCGCGAGGCGCTCCAGCTCGGCCACAACTACATCGGC 166
Query 153198 ACCGAGCATCTCCTGCTGGCCCTGATCCGCGAGGGTGAGGGCGTGGGCTGCCAGGTGCTG 153257
|||||||| ||||||| | ||| ||||||||||| |||||||| | | |||||| |||
Sbjct 165 ACCGAGCACATCCTGCTCGGCCTCATCCGCGAGGGCGAGGGCGTCGCCGCCCAGGTCCTG 106
Query 153258 GTGAAGCGCGGCGCGGAGCTGACCAAGGTCCGCCAGGTGGTCATCCAGCTGCTGTCCGGG 153317
|||| ||||| || || | |||||| |||||| |||||||||||| ||||||||
Sbjct 105 ACGAAGATGGGCGCCGACCTCAACAAGGTGCGCCAGCAGGTCATCCAGCTCCTGTCCGGC 46
Query 153318 TA 153319
||
Sbjct 45 TA 44
>seq1322
Length=169
Score = 114 bits (126), Expect = 1e-20
Identities = 90/108 (83%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 152885 CATCTTCGAGAGATTCACCGACCGCGCCCGTCGCGTCTGCGTCCTCGCCCAAGAGGAAGC 152944
||| |||||||||||||| ||||| |||||||| ||| |||||||||||| || || ||
Sbjct 61 CATGTTCGAGAGATTCACAGACCGAGCCCGTCGGGTCGTCGTCCTCGCCCAGGAAGAGGC 120
Query 152945 GCGCATGCTCAACCATGCGTACATCGGCACCGAGCATCTGCTGCTCGG 152992
||| ||||||||||| ||||||||||||||||| | || |||||
Sbjct 121 GCGGATGCTCAACCACAACTACATCGGCACCGAGCACATCCTCCTCGG 168
>seq5911
Length=212
Score = 82.4 bits (90), Expect = 8e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 92615 GCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTCAAAT 92674
||||||| ||||||||||||||||||| ||||||||||| |||| || |||||||||
Sbjct 103 GCGGGGTGGAGCAGCTCGGTAGCTCGCTGGGCTCATAACCCAGAGGTCGCAGGTTCAAAT 44
Query 92675 CCCACTCCCGCCACT 92689
|| | ||||| |||
Sbjct 43 CCTGCCCCCGCTACT 29
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 526551828954000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |