Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177975.1_202017-04- 25] 7,075 sequences; 12,875,875 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq2518 122 2e-22 seq2208 105 2e-17 seq2623 95.1 3e-14 seq114 86.0 1e-11 >seq2518 Length=33988 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 199415 CTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCA 199474 |||| ||||||||| ||||| ||||||||||| | |||||||| | || || || ||| Sbjct 11420 CTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA 11479 Query 199475 TCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGC 199534 ||||| || ||||| ||||| || || | | |||||||| ||| ||| ||||| Sbjct 11480 TCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTG 11539 Query 199535 TCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATC 199594 || ||||| || ||| ||| || | ||||| | | ||| || || | || || Sbjct 11540 TCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATA 11599 Query 199595 GTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || || || || ||||||||||| Sbjct 11600 GTCTTACCTGTCAGTGTCTTGACAAAAATTTG 11631 Score = 118 bits (130), Expect = 2e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| || | ||| ||||| || |||||||||| ||||||||||| ||| || || || Sbjct 11647 TCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACC 11706 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||| || ||||| || || || || | | ||| || |||||| || |||||| Sbjct 11707 ATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTT 11766 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || |||||||| || ||| || | ||||| | | ||| || || | || || Sbjct 11767 ATCTTGAATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTAT 11826 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || |||||||| || |||||||| Sbjct 11827 AGTCTTCCCTGTTAGAGTTTTGACGAAAATTTG 11859 >seq2208 Length=28744 Score = 105 bits (116), Expect = 2e-17 Identities = 148/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| ||| | ||| | ||| || || ||||| | ||||||||||| ||| || || || Sbjct 17681 TCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 17622 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||||||| ||||| || || ||||| | | || ||||| || || ||||| Sbjct 17621 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 17562 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || ||||||||| ||| || || | ||||| | | ||| || ||||| ||||| Sbjct 17561 GTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 17502 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAA 199621 |||||||| || | ||| || |||||| Sbjct 17501 GGTCTTACCAGTCAAAGTCTTGACAAAA 17474 >seq2623 Length=54717 Score = 95.1 bits (104), Expect = 3e-14 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| ||| | || | ||| || |||||||||| ||||||||||| | ||| || || Sbjct 37388 TCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACC 37447 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||||||| ||||| || || ||||| | | || ||||| || || ||||| Sbjct 37448 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 37507 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || ||||| ||| || || | |||||| | | ||| || ||||| ||||| Sbjct 37508 GTCTTGGATCTTGGACTTGACATTATCAATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 37567 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAA 199620 |||||||| || | ||| || || || Sbjct 37568 GGTCTTACCAGTCAAAGTCTTAACGAA 37594 >seq114 Length=22662 Score = 86.0 bits (94), Expect = 1e-11 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989 ||| | | ||||| || || ||||| ||||||||||| || |||||| |||| |||||| Sbjct 8584 AAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAACA 8643 Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 201024 |||| || || |||||||| ||| | || |||||| Sbjct 8644 TCCAAAAGGAATCTACTCTACACTTGGTCTTGAGA 8678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178814732599025