Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177975.1_202017-04- 25] 7,075 sequences; 12,875,875 total letters Query= NC_021299.1 Length=80955 Score E Sequences producing significant alignments: (Bits) Value seq1967 578 2e-160 seq241 282 2e-71 >seq1967 Length=687 Score = 578 bits (640), Expect = 2e-160 Identities = 493/606 (81%), Gaps = 4/606 (1%) Strand=Plus/Plus Query 59266 GCCATCAACTGGAACCGCGTCTTTGACGACAAGGATCTTGAGGTCTGGAACCGGTTGACC 59325 || |||||||||||||| || ||||| ||||| || ||||| ||| |||| | | Sbjct 44 GCGATCAACTGGAACCGTCTCGAGGACGAGAAGGACCTCGAGGTGTGGGACCGCCTCGTC 103 Query 59326 AACAACTTCTGGCTGCCAGAGAAGATCCCTGTCTCCAACGACATCCCGGCCTGGGGCACG 59385 |||||||||||||| ||||| | || || || |||||||||| | | ||| |||| Sbjct 104 GGGAACTTCTGGCTGCCCGAGAAAGTGCCGGTGTCGAACGACATCCAGTCGTGGAACACG 163 Query 59386 CTGACGGAGGAAGAGCAAGTCCTCACGATGCGGGTCTTCACCGGCCTGACGATGCTCGAC 59445 || || | | | ||||| | ||||||||||| || ||||||||||||||| |||| ||| Sbjct 164 CTCACCGCGCAGGAGCAGGAGCTCACGATGCGCGTATTCACCGGCCTGACGCTGCTGGAC 223 Query 59446 ACGATCCAGGGCACCGTGGGTGCTGTGAGCCTGATCCCTGACGCGATCACGCCGCACGAG 59505 |||||||||||||| || || || ||| || ||||| ||||||||||||||||||||| Sbjct 224 ACGATCCAGGGCACGGTCGGCGCGGTGTCGCTCATCCCCGACGCGATCACGCCGCACGAG 283 Query 59506 GAGGCGGTGTACACGAACATCGCGTTCATGGAGTCGGTGCACGCGAAGAGCTACAGCAAC 59565 || ||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 284 GAAGCGGTGTACACCAACATCGCGTTCATGGAGTCGGTGCACGCCAAGAGCTACTCGTCG 343 Query 59566 ATCTTCTCGACGCTGTGCTCGTCCAAGGAGATCGACGCGGCGTTCCGCTGGTCGGAGGAG 59625 |||||||||||||||||||| | |||||||||| ||||||||||||||||||||| Sbjct 344 ATCTTCTCGACGCTGTGCTCCACTCGTGAGATCGACGACGCGTTCCGCTGGTCGGAGGAG 403 Query 59626 AATCCGAACCTGCAACGCAAGGCTCAGATCGTCCTGGACTACTACCAGGGTGACGATCCG 59685 || |||||||| || |||||||| |||||||| ||||||||||| |||| ||| ||| Sbjct 404 AACCCGAACCTCCAGCGCAAGGCCGAGATCGTCATGGACTACTACAAGGGCGACTCGCCG 463 Query 59686 CTGAAGCGGAAGGTGGCCTCGACGTTGCTGGAGGGGTTCCTGTTCTACTCGGGCTTCTAC 59745 || ||||| ||||| || ||| |||| ||| ||||| |||||||| ||||||||| Sbjct 464 CTCAAGCGCAAGGTCGCGAGCACGCTGCTCGAGTCATTCCTCTTCTACTCCGGCTTCTAC 523 Query 59746 CTGCCGATGTACTGGTCTAGTCGGGGG--AAGCTGACGAACACGGCCGACATGATCCGGC 59803 ||||||||||||||||| |||| | | ||||||||||||||||||||| | ||||| | Sbjct 524 CTGCCGATGTACTGGTC--GTCGCGCGCCAAGCTGACGAACACGGCCGACCTCATCCGCC 581 Query 59804 TCATCATTCGTGACGAGGCGGTGCACGGCTACTACATCGGATACAAGTTCCAGCGCGGCC 59863 ||||||| || |||||||| |||||||| ||||||||||| |||||||||||| || | Sbjct 582 TCATCATCCGCGACGAGGCCGTGCACGGGTACTACATCGGCTACAAGTTCCAGAAGGGTC 641 Query 59864 TGGAGA 59869 | |||| Sbjct 642 TCGAGA 647 >seq241 Length=388 Score = 282 bits (312), Expect = 2e-71 Identities = 252/316 (80%), Gaps = 0/316 (0%) Strand=Plus/Minus Query 59887 CGCGAGGAGCTGAAGGACTACACGTACGGTCTGCTACTCGAGTTGTACGACAACGAGATT 59946 ||||| ||||| |||| ||||||| || ||||| ||||| ||||||| |||||| | Sbjct 364 CGCGACGAGCTCAAGGCGTACACGTTCGAGCTGCTCTTCGAGCTGTACGAGAACGAGGTG 305 Query 59947 GAGTACACGCAGGATCTGTACGACGGCGTGGGACTGACTGAGGATGTCAAGATGTTCCTG 60006 |||||||| |||| || ||||||||||| || ||||| ||||| ||||||| ||||||| Sbjct 304 CAGTACACGGAGGACCTCTACGACGGCGTCGGGCTGACCGAGGACGTCAAGAAGTTCCTG 245 Query 60007 CGCTACAACGCCAACAAGGCGCTGATGAATCTCGGCTACGAGGCGCTGTTCCCGCGCGAC 60066 || |||||||||||||||||||| ||||| ||||||||||||||||| ||||| ||| Sbjct 244 CGGTACAACGCCAACAAGGCGCTCATGAACCTCGGCTACGAGGCGCTCTTCCCCAAGGAC 185 Query 60067 GAAACCGAGGTGAATGCGGCGATCTTGGCGGCACTGTCCCCTGGCGGGGACGAGAACCAC 60126 || ||||| || || |||||||| | |||| ||||| || || |||||||||||| Sbjct 184 GAGACCGACGTCAACCCGGCGATCCTCTCGGCGCTGTCGCCGAACGCCGACGAGAACCAC 125 Query 60127 GACTTCTTCTCGGGCTCTGGCAGCACGTATGTGATTGGCAAGGCTGAGGTTACGGAAGAC 60186 ||||||||||| || || ||| |||| || || |||||||| | | || || ||| Sbjct 124 GACTTCTTCTCCGGGTCCGGCTCGTCGTACGTCATCGGCAAGGCCGTGAACACCGAGGAC 65 Query 60187 GAGGATTGGGACTTCT 60202 || || |||||||||| Sbjct 64 GACGACTGGGACTTCT 49 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 258908873252700