Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177975.1_202017-04- 25] 7,075 sequences; 12,875,875 total letters Query= NC_021309.1 Length=74711 Score E Sequences producing significant alignments: (Bits) Value seq5541 152 2e-32 seq4752 113 2e-20 seq6851 96.9 2e-15 >seq5541 Length=284 Score = 152 bits (168), Expect = 2e-32 Identities = 190/260 (73%), Gaps = 13/260 (5%) Strand=Plus/Plus Query 59253 GGCCGTCGCCAACTTCACCGTCGTGTCCAACGAACGCCGCCG-----CGACGCCCAGGGC 59307 ||| || ||||||||||| || | ||||| |||||| | |||| |||| Sbjct 17 GGCGGTGGCCAACTTCACGGTGGCGTCCA-----CGCCGCGGACCTTCGACCGCCAGTCG 71 Query 59308 AAC---TGGGTCGACGGCGACGCCACATTCCTCCGCTGCACCATCTGGCGCGACGCCGCC 59364 ||| ||| ||||| ||| || ||| | |||||| | ||||||||||| ||||| Sbjct 72 AACGAGTGGAAGGACGGGGACACCCTGTTCATGCGCTGCTCGATCTGGCGCGAGGCCGCG 131 Query 59365 GAGAACGTGGCGGAAAGCCTCCAGAAAGGCCAGCGCGTCATCGTGCATGGCTACCTCAAG 59424 |||||||| ||||| || ||| ||| ||||||||||||||| ||| |||| Sbjct 132 GAGAACGTCGCGGAGTCGCTGACGAAGGGCATGCGCGTCATCGTGCAGGGCCGCCTCGTC 191 Query 59425 CAGCGCTCCTTCGAGACCAAGGAGGGCGACAAGCGCACCGTCATCGAGGTGGAGGTAGAC 59484 |||||||| | ||||||| ||||| || |||||||||||| ||||| || |||| ||| Sbjct 192 CAGCGCTCGTACGAGACCCGCGAGGGGGAGAAGCGCACCGTCGTCGAGCTGCAGGTGGAC 251 Query 59485 GAGATCGGCCCGTCGCTGCG 59504 |||||| | || || ||||| Sbjct 252 GAGATCTGTCCCTCCCTGCG 271 >seq4752 Length=424 Score = 113 bits (124), Expect = 2e-20 Identities = 149/206 (72%), Gaps = 3/206 (1%) Strand=Plus/Minus Query 65095 GCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCG 65154 || ||| |||| ||||| || || ||||| |||||||| || || || |||||||||||| Sbjct 205 GCGGAGATCGAGGGCGAGATGGGCGACAGCCACGTCGGTCTCCAGGCCCGCCTCATGTCG 146 Query 65155 CAGGCCATGCGCAAGCTCACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTC 65214 ||||| |||||||| |||| || | || | || |||| | ||| || Sbjct 145 CAGGCGCTGCGCAAGATCACCGGTGCGCTCAGCGCGTCCGGCACGACCGCCATCTTCATC 86 Query 65215 AACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACGGGC 65274 |||||| | |||||||||||||| |||| || |||| | ||||| || || || Sbjct 85 AACCAGCTCCGCGAGAAGATCGG---CGTGTTCTTCGGCTCTCCCGAGACGACGACCGGT 29 Query 65275 GGAAAGGCTTTGAGGTTCTACGCCTC 65300 || ||||| ||| |||||||||||| Sbjct 28 GGCAAGGCGCTGAAGTTCTACGCCTC 3 >seq6851 Length=160 Score = 96.9 bits (106), Expect = 2e-15 Identities = 120/163 (74%), Gaps = 6/163 (4%) Strand=Plus/Minus Query 49627 CTCGGCGCCATGCTTCTCTCCAAGAACGCCACCCCGGCCGTCATGGAG---ATTCTCAAG 49683 ||||||| |||||| || || ||| |||||| | ||| |||||| ||| || | | Sbjct 160 CTCGGCGGCATGCTGCTGTCGAAGGACGCCATCGCGGACGTCATCGAGCAGATCCGCGGC 101 Query 49684 CCCGAGGACTTCTACCGCCCCAACCACGCCACCGTCTACCAGATCATCACCGACCTCTAC 49743 |||| |||||||||||| |||| | ||||||| || |||| |||||||||| Sbjct 100 TCCGA---CTTCTACCGCCCGGCGCACGAGATCGTCTACGAGTCGATCATCGACCTCTAC 44 Query 49744 ATGGCCGGTGAGTCCGCCGACGTCATCACCGTCGCCGCGGAGC 49786 ||| ||| ||||||||| |||||||||| |||||||| Sbjct 43 GGTCGCGGCGAGCCCGCCGACGCGATCACCGTCGTCGCGGAGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 238929796128400