Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177975.1_202017-04- 25] 7,075 sequences; 12,875,875 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq244 250 3e-61 >seq244 Length=7683 Score = 250 bits (276), Expect = 3e-61 Identities = 867/1339 (65%), Gaps = 38/1339 (3%) Strand=Plus/Minus Query 104266 AGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCC-AAGGTATGTTCATTCACG 104324 ||| || || ||| || || || || || |||||| | || ||| || | ||||| Sbjct 6259 AGATATCGAGGCTGCTTTAGAAACGTATAACTTGATGTCTCTAAAATATTTT-ACTCACG 6201 Query 104325 CAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTA 104384 | | ||||| | |||||||| ||||| |||| ||| ||||||||| ||| ||| | Sbjct 6200 CCTCTCCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTGG 6141 Query 104385 TCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAA 104444 | |||| ||||||||||| ||| | || || || | || | | ||| ||||| | Sbjct 6140 TTGCCATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGAATGTGCTTTGA 6081 Query 104445 TCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTC 104504 | || || ||||| |||||||| | || |||||| | | | | | | ||| Sbjct 6080 TTTCCAAAACTGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTCAACTGGTTCTT 6021 Query 104505 GTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACG 104564 ||| || ||||| ||| || | ||| | ||||| ||| |||| || || || Sbjct 6020 ACATTGCTGGTACAAACGGTACTTCTAACGGTTTAATTCCTATGATTCGTGTTTTCAATA 5961 Query 104565 CCACAGCGCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTAT 104620 ||| || || ||||| | || | ||| | |||| || | | || | || Sbjct 5960 ACACTGCCCGTTATGTTGACCAGGGTGGTAAT-AAAAGACCTGGTGCGTTTGCCCTTTAC 5902 Query 104621 CTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGAC 104680 || || |||||||| || ||||| | || || |||| | | ||||| ||| | Sbjct 5901 CTGGAACCATGGCATGCTGATATATTTGATTTTATTGATATTAGGAAGAACCACGGTAAA 5842 Query 104681 GAGGAGGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAA 104739 ||||| | |||| | ||| | ||| | ||||| |||||||| ||||| |||||||| Sbjct 5841 GAGGAAATTC-GTGCAAGAGATTTGTTCCCTGCTCTATGGATTCCTGATCTTTTCATGAA 5783 Query 104740 GAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACA-AGGCACCTGGTCTCT 104798 | | || || || | ||| | ||| | | || | |||| ||| || |||||| | Sbjct 5782 GCGTGTCGAAGAAAATGGGACCTGGACATTATTCTCTCCA-ACATCAGCTCCTGGTTTAA 5724 Query 104799 CCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGG 104858 |||| ||||| |||||||| || || || || |||||| |||||||||| | Sbjct 5723 GCGATTGTTACGGTGACGAGTTTGAGGCTCTATATACCCGCTACGAGAAAGAAGGTCGTG 5664 Query 104859 CGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGA 104918 | ||| | ||| | | ||| | | ||| | | ||||||| || | Sbjct 5663 ---GTAAGACTATCAAAGCCCAAAAATTATGGTATTCCATTTTGGAAGCTCAAACTGAAA 5607 Query 104919 CTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATT 104978 |||||||||| | | | ||||||| || || |||||| ||| ||||||||| || | Sbjct 5606 CTGGTACACCTTTCGTTGTTTACAAGGATGCTTGTAACAGAAAATCTAATCAAAAAAACT 5547 Query 104979 TGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATG 105038 | ||||| |||||| || || | || ||||| | |||| ||| ||||| Sbjct 5546 TAGGTGTCATCAAGTCATCAAACTTATGCTGTGAAATTGTTGAATACTCAGCTCCAGATG 5487 Query 105039 AGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCC------------CAAGTATGTGG 105086 | || ||||| |||||| | || || | || | || | | || || Sbjct 5486 AAACTGCTGTTTGTAACTTGGCTTCCGTTGCCTTACCAGCATTCATTGAAACTTCTGAGG 5427 Query 105087 ATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCA 105146 || |||| |||| | | ||||| | || ||| || | ||| ||| || Sbjct 5426 ATGGTAAGACTTCCACATACAACTTCAAAAAATTACATGAAATTGCTAAAGTTGTTACTC 5367 Query 105147 AAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTA 105206 || |||||||||| |||||| | |||| ||||| ||||| || | ||||| | Sbjct 5366 GTAATTTAAACAGAGTCATTGATCGTAATTACTACCCTGTTGAAGAAGCGAGAAAATCCA 5307 Query 105207 ATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTT 105266 |||||||||| | ||||||| | | |||||||| |||||||| || ||||| || | Sbjct 5306 ATATGAGACATAGACCAATTGCTTTGGGTGTTCAAGGTCTCGCTGACACTTTCATGCTGT 5247 Query 105267 GTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCA 105326 || |||||||||| || ||||| | ||| | || ||||| || | Sbjct 5246 TACGTTTGCCATTTGATTCTGAGGAAGCCCGTTTGCTAAATATCCAAATCTTTGAAACTA 5187 Query 105327 TGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAA 105386 | ||||| ||| | | || || || || | || || || |||||||| |||| Sbjct 5186 TTTATCATGCCTCCATGGAAGCTTCTTGTGAACTAGCTCAGAAGGACGGTCCATACGAAA 5127 Query 105387 CCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGA 105446 | || | || ||||| ||||| ||||| | || || ||||||||||||| | | | Sbjct 5126 CTTTCCAAGGATCTCCTGCTTCTCAAGGTATACTACAGTTTGATATGTGGG-ACCAAAAA 5068 Query 105447 CCAAGCTTCA-CTACGACTGGGAAGCTCTCAAGGAACG-CATCAAGGAGAAGGGTCTTCG 105504 || | || | || ||||| | || ||| || | |||| | || | ||| || | Sbjct 5067 CCCTACGGCATGTGGGATTGGGACAC-CTTAAGAAAAGATATCATGAAGCATGGTATTAG 5009 Query 105505 TAACAGTCTCCT----CATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTA 105560 || |||| |||||| |||||||| || || ||||| | ||||| |||||| Sbjct 5008 AAA----TTCCTTGACCATGGCACCAATGCCTACTGCATCCACATCCCAAATATTGGGTT 4953 Query 105561 ATAATGAATGCTTTGAACC 105579 |||||||||| || ||||| Sbjct 4952 ATAATGAATGTTTCGAACC 4934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583209217873000