Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177975.1_202017-04-
25] 7,075 sequences; 12,875,875 total letters
Query= NC_029079.1
Length=75339
Score E
Sequences producing significant alignments: (Bits) Value
seq5541 147 1e-30
seq4752 127 1e-24
seq6851 96.9 2e-15
>seq5541
Length=284
Score = 147 bits (162), Expect = 1e-30
Identities = 189/260 (73%), Gaps = 13/260 (5%)
Strand=Plus/Plus
Query 59530 GGCCGTCGCCAACTTCACCGTCGTGTCCAACGAACGCCGCCG-----CGACGCCCAGGGC 59584
||| || ||||||||||| || | ||||| |||||| | |||| ||||
Sbjct 17 GGCGGTGGCCAACTTCACGGTGGCGTCCA-----CGCCGCGGACCTTCGACCGCCAGTCG 71
Query 59585 AAC---TGGGTCGACGGCGACGCCACATTCCTCCGCTGCACCATCTGGCGCGACGCCGCC 59641
||| ||| ||||| ||| || ||| | |||||| | ||||||||||| |||||
Sbjct 72 AACGAGTGGAAGGACGGGGACACCCTGTTCATGCGCTGCTCGATCTGGCGCGAGGCCGCG 131
Query 59642 GAGAACGTAGCGGAAAGCCTCCAGAAAGGCCAGCGCGTCATCGTGCATGGCTACCTCAAG 59701
|||||||| ||||| || ||| ||| ||||||||||||||| ||| ||||
Sbjct 132 GAGAACGTCGCGGAGTCGCTGACGAAGGGCATGCGCGTCATCGTGCAGGGCCGCCTCGTC 191
Query 59702 CAGCGCTCCTTCGAGACCAAGGAAGGCGACAAGCGCACCGTCATCGAGGTGGAGGTAGAC 59761
|||||||| | ||||||| || || || |||||||||||| ||||| || |||| |||
Sbjct 192 CAGCGCTCGTACGAGACCCGCGAGGGGGAGAAGCGCACCGTCGTCGAGCTGCAGGTGGAC 251
Query 59762 GAGATCGGCCCGTCGCTGCG 59781
|||||| | || || |||||
Sbjct 252 GAGATCTGTCCCTCCCTGCG 271
>seq4752
Length=424
Score = 127 bits (140), Expect = 1e-24
Identities = 152/206 (74%), Gaps = 3/206 (1%)
Strand=Plus/Minus
Query 66429 GCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCG 66488
|| ||| |||| ||||| || || ||||| |||||||| || || || ||||||||||||
Sbjct 205 GCGGAGATCGAGGGCGAGATGGGCGACAGCCACGTCGGTCTCCAGGCCCGCCTCATGTCG 146
Query 66489 CAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTC 66548
||||| |||||||| ||||||| | || | || |||| | ||| ||
Sbjct 145 CAGGCGCTGCGCAAGATCACCGGTGCGCTCAGCGCGTCCGGCACGACCGCCATCTTCATC 86
Query 66549 AACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAACGAGACCACCACGGGC 66608
|||||| | |||||||||||||| |||| || |||| | |||||| || || ||
Sbjct 85 AACCAGCTCCGCGAGAAGATCGG---CGTGTTCTTCGGCTCTCCCGAGACGACGACCGGT 29
Query 66609 GGCAAGGCTTTGAGGTTCTACGCCTC 66634
|||||||| ||| ||||||||||||
Sbjct 28 GGCAAGGCGCTGAAGTTCTACGCCTC 3
>seq6851
Length=160
Score = 96.9 bits (106), Expect = 2e-15
Identities = 120/163 (74%), Gaps = 6/163 (4%)
Strand=Plus/Minus
Query 49751 CTCGGCGCCATGCTTCTCTCCAAGAACGCCACCCCGGCCGTCATGGAG---ATTCTCAAG 49807
||||||| |||||| || || ||| |||||| | ||| |||||| ||| || | |
Sbjct 160 CTCGGCGGCATGCTGCTGTCGAAGGACGCCATCGCGGACGTCATCGAGCAGATCCGCGGC 101
Query 49808 CCCGAGGACTTCTACCGCCCCAACCACGCCACCGTCTACCAGATCATCACCGACCTCTAC 49867
|||| |||||||||||| |||| | ||||||| || |||| ||||||||||
Sbjct 100 TCCGA---CTTCTACCGCCCGGCGCACGAGATCGTCTACGAGTCGATCATCGACCTCTAC 44
Query 49868 ATGGCCGGTGAGTCCGCCGACGTCATCACCGTCGCCGCGGAGC 49910
||| ||| ||||||||| |||||||||| ||||||||
Sbjct 43 GGTCGCGGCGAGCCCGCCGACGCGATCACCGTCGTCGCGGAGC 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 240939222847500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |